Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13]
2,367 sequences; 40,272,913 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq216 140 5e-31
>seq216
Length=2934
Score = 140 bits (154), Expect = 5e-31
Identities = 184/252 (73%), Gaps = 6/252 (2%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| |||||||||||| ||| || ||||| || |||| | || || |||
Sbjct 1999 TTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 1941
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| || |||||||| |||||||| || || | |||| | | | || ||||||
Sbjct 1940 GTGCTATGTTTTTAATAAACAGTTGCAGGGGCCTGGTTTCTGAGGCTGTCGCCCGCTCAA 1881
Query 122 ----CACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176
|| ||| | ||||| || || ||||||||||||||||||| |||||||||
Sbjct 1880 GGAGCAAGTCCTATCACCGACAACAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGC 1821
Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
| | |||||| | || ||||| | | | ||| || || | ||| ||||||||||||||||
Sbjct 1820 CTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACCTGACCACCTGTGT 1761
Query 237 CGGTTTACGGTA 248
|||||| ||||
Sbjct 1760 CGGTTTCGGGTA 1749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694384077191
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |