Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq55 502 1e-139 seq212 444 2e-122 seq52 223 1e-55 >seq55 Length=717253 Score = 502 bits (556), Expect = 1e-139 Identities = 335/371 (90%), Gaps = 5/371 (1%) Strand=Plus/Plus Query 317 TCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG 376 |||||| || |||||||| ||||| ||||||||| |||||||| |||| |||||| || Sbjct 714603 TCGGGGTGTCTTATAGCCGAGGGTGCAATGCGGCCTGCCTGGACCGAGGAACGCGCTTCG 714662 Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 ||| ||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||| Sbjct 714663 GCTCGGACGCTGGCGTAATGGTCGTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCT 714722 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496 |||||||| ||||||||| ||||||||||||||| |||| | |||||| ||||||||||| Sbjct 714723 AACATCTACGCGAGTGTTCGGGTGTCAAACCCGTACGCGCAGTGAAAGCGAACGGAGGTG 714782 Query 497 GGAACCC----GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552 ||| ||| | | ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 714783 GGAGCCCCCTCGCG-GGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 714841 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 | |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 714842 ACGAGCGTAGCTGTGGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAG 714901 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 714902 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGG 714961 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 714962 TATAGGGGCGA 714972 >seq212 Length=5467 Score = 444 bits (492), Expect = 2e-122 Identities = 332/385 (86%), Gaps = 3/385 (1%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 383 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 324 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 323 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 264 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 263 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 204 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 |||| |||||||| |||||| | | ||| |||| | ||| ||||||| ||| | | Sbjct 203 TTTGCGACCAGACTCGCCCGC-GGGGTTCAGCCGG-CATTCGTGCCGGTGTACTTCCCCG 146 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || | ||||||| || | | |||||| ||| |||||||| ||||||| | || || Sbjct 145 TGGGCGGGCCAGCGTCGGTTTGGGCGGCCGGTCAAAGGCCCTCGGAATGTATCACCTCTC 86 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| || |||||||| ||||| ||||||||| |||||||| |||| |||||| |||| Sbjct 85 GGGGTGTCTTATAGCCGAGGGTGCAATGCGGCCTGCCTGGACCGAGGAACGCGCTTCGGC 26 Query 379 TAGGATGCTGGCGTAATGGTTGTAA 403 | ||| |||||||||||||| |||| Sbjct 25 TCGGACGCTGGCGTAATGGTCGTAA 1 >seq52 Length=482 Score = 223 bits (246), Expect = 1e-55 Identities = 158/181 (87%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | || | |||||| |||||||||||||||||| | ||||||| ||| ||| Sbjct 259 TGTGATGCGCTCTCAAAGAGTCGCGTTGTTTGGGAATGCAGCGCAAAATGGGTGGTGAAT 200 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 199 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 140 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||| Sbjct 139 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTT 80 Query 203 G 203 | Sbjct 79 G 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995109400