Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq55 223 6e-56 seq212 147 4e-33 seq68 123 4e-26 >seq55 Length=717253 Score = 223 bits (246), Expect = 6e-56 Identities = 169/196 (86%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 717060 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 717117 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 717118 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 717177 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| || |||| ||||||| |||||||||||||| || |||| | Sbjct 717178 GAACGCGGCGATGTAGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCATGT 717237 Query 179 ACCTTAGCAGGCCGGC 194 |||| ||||||| ||| Sbjct 717238 ACCTCAGCAGGCTGGC 717253 >seq212 Length=5467 Score = 147 bits (162), Expect = 4e-33 Identities = 147/187 (79%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 97 GCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGA 156 |||||||||||||||||| |||| ||||| || ||| || |||| ||||||| ||| Sbjct 5467 GCCTCTAAGTCAGAATCCGTGCCGGAACGCGGCGATGTAGCCCCGCACGTCGTAGTTGGA 5408 Query 157 TACGAATAGGCTTC--GGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---A 211 ||||||||||| || |||| | |||| ||||||| ||| |||| | |||| || | Sbjct 5407 TACGAATAGGCCTCCGGGCCATGTACCTCAGCAGGCTGGCGACGGCC--CCCGGGGAGAA 5350 Query 212 AGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGC 271 | | | ||| ||| |||||||||||||||| ||||| |||| ||||| |||||| ||| Sbjct 5349 ACCCCCGGGGGCT-GGCTGGCGGATTGCAATGTCACCTCGCGCGGGGATGAATCCTCTGC 5291 Query 272 AGACGAC 278 ||||||| Sbjct 5290 AGACGAC 5284 >seq68 Length=345 Score = 123 bits (136), Expect = 4e-26 Identities = 134/174 (77%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 108 AGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 ||||||| |||| ||||| || |||| | || |||| ||||||| |||||||||||||| Sbjct 345 AGAATCCGTGCCGGAACGCGGCGATTTTGCCCCGCACGTCGTAGTTGGATACGAATAGGC 286 Query 168 TTC--GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCT 224 || |||| || |||| ||||||| ||| |||| | | | | || | | | | ||| Sbjct 285 CTCCGGGCCACGCACCTCAGCAGGCTGGCGACGGCTCTTAGGGAGAAACCCCCGAGAGCT 226 Query 225 CAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||||||||||| ||||| |||| |||||| ||||| |||| ||||| Sbjct 225 -GGCTGGCGGATTGCAATGTCACCTCGCGCGGGGATAGATCCTCTGCAAACGAC 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198190592