Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq546 502 1e-139
seq459 479 1e-132
seq117 188 3e-45
seq127 132 2e-28
>seq546
Length=3101
Score = 502 bits (556), Expect = 1e-139
Identities = 335/371 (90%), Gaps = 5/371 (1%)
Strand=Plus/Plus
Query 317 TCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG 376
|||||| || |||||||| ||||| ||||||||| |||||||| |||| |||||| ||
Sbjct 12 TCGGGGTGTCTTATAGCCGAGGGTGCAATGCGGCCTGCCTGGACCGAGGAACGCGCTTCG 71
Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436
||| ||| |||||||||||||| |||| | ||||||||| |||||||||||||||||||
Sbjct 72 GCTCGGACGCTGGCGTAATGGTCGTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCT 131
Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496
|||||||| ||||||||| ||||||||||||||| |||| | |||||| |||||||||||
Sbjct 132 AACATCTACGCGAGTGTTCGGGTGTCAAACCCGTACGCGCAGTGAAAGCGAACGGAGGTG 191
Query 497 GGAACCC----GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
||| ||| | | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 192 GGAGCCCCCTCGCG-GGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 250
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
| |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 251 ACGAGCGTAGCTGTGGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAG 310
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 311 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGG 370
Query 673 TATAGGGGCGA 683
|||||||||||
Sbjct 371 TATAGGGGCGA 381
>seq459
Length=5504
Score = 479 bits (530), Expect = 1e-132
Identities = 357/414 (86%), Gaps = 3/414 (1%)
Strand=Plus/Minus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 412 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 353
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 352 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 293
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 292 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 233
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258
|||| |||||||| |||||| | | ||| |||| | ||| ||||||| ||| | |
Sbjct 232 TTTGCGACCAGACTCGCCCGC-GGGGTTCAGCCGG-CATTCGTGCCGGTGTACTTCCCCG 175
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|| | ||||||| || | | |||||| ||| |||||||| ||||||| | || ||
Sbjct 174 TGGGCGGGCCAGCGTCGGTTTGGGCGGCCGGTCAAAGGCCCTCGGAATGTATCACCTCTC 115
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| || |||||||| ||||| ||||||||| |||||||| |||| |||||| ||||
Sbjct 114 GGGGTGTCTTATAGCCGAGGGTGCAATGCGGCCTGCCTGGACCGAGGAACGCGCTTCGGC 55
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432
| ||| |||||||||||||| |||| | ||||||||| |||||||||||||||
Sbjct 54 TCGGACGCTGGCGTAATGGTCGTAAATGACCCGTCTTGAAACACGGACCAAGGA 1
>seq117
Length=48261
Score = 188 bits (208), Expect = 3e-45
Identities = 130/145 (90%), Gaps = 3/145 (2%)
Strand=Plus/Plus
Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGA 60
Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCC 217
||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct 61 AAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGACCAGACCCGCC 120
Query 218 CGCAGTTGCTCAACCGGC--CCCTC 240
||| | |||| ||||| |||||
Sbjct 121 CGC-GGGCCTCAGCCGGCATCCCTC 144
>seq127
Length=45703
Score = 132 bits (146), Expect = 2e-28
Identities = 99/116 (85%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 317 TCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG 376
|||||| || |||||||| ||||| ||||||||| |||||||| |||| |||||| ||
Sbjct 45588 TCGGGGTGTCTTATAGCCGAGGGTGCAATGCGGCCTGCCTGGACCGAGGAACGCGCTTCG 45647
Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432
||| ||| |||||||||||||| |||| | ||||||||| |||||||||||||||
Sbjct 45648 GCTCGGACGCTGGCGTAATGGTCGTAAATGACCCGTCTTGAAACACGGACCAAGGA 45703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079981059650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |