Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq35 203 3e-47 seq611 165 6e-36 >seq35 Length=214891 Score = 203 bits (224), Expect = 3e-47 Identities = 407/601 (68%), Gaps = 2/601 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| |||| ||||||||||| ||||| || |||| ||||| | Sbjct 142872 CATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTT 142813 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||| || ||||| | || |||||||| ||||| ||||||||||| || || ||||| Sbjct 142812 ACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTA 142753 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 || || || | ||| || ||| || || |||||||| || | ||| ||||| Sbjct 142752 AATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTAGCAGTGTTGTT 142693 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || || | ||| || || | |||||||| ||||| ||||| | ||| ||| Sbjct 142692 GAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGA 142633 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 ||| || || || |||||| || || || ||||| || || ||||||||||| Sbjct 142632 GCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCAT 142573 Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAG 66699 |||||| | || | | || || |||||| || |||| || | ||| Sbjct 142572 GGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAG 142513 Query 66700 GTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTG 66759 | |||| || ||| ||||||| ||| || | || ||| || || || | ||| || Sbjct 142512 GAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATG 142453 Query 66760 CGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCC 66819 || ||||| | |||||||| | ||| ||||| ||| | ||||| || | ||| Sbjct 142452 AGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTCAATATTGTTGCC 142393 Query 66820 ATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-T 66878 |||||| || | ||| ||||||| | || || || || || | || || || | Sbjct 142392 ATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTC-AGCAACCTTGCCAT 142334 Query 66879 TGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAAT 66938 |||| ||| | |||||| || || || ||||||| ||| || | ||| ||||| | Sbjct 142333 TGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAAGTTGTAGTTGAAGT 142274 Query 66939 C 66939 | Sbjct 142273 C 142273 Score = 113 bits (124), Expect = 4e-20 Identities = 257/382 (67%), Gaps = 16/382 (4%) Strand=Plus/Minus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCG-C 65871 ||||||| ||| | || |||| | | ||||| ||||| |||| ||| | ||| | | Sbjct 143441 TCGGCCAAACCATTGACACCAAGAGCAATGGGGCGATGCCGCATGTTGCT-CTTCTTGGC 143383 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 ||| || ||||||||||| || | ||| ||||| ||||| || || || || || Sbjct 143382 CTCTGGAACAGGGTAGTAGTTTACATCAATAATCTTGTTCAAGTTACGAACCAAGACCTG 143323 Query 65932 CACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACA 65990 ||| | ||| ||| | |||| ||| | | | | | || | | || Sbjct 143322 CACAACCTCGT-GCAGCTTGCCGAAGTCATACTCTCCACG------GGCCGCGTCG---- 143274 Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 ||||| | ||||| || ||||| || |||||||||||||| | ||||||||||| Sbjct 143273 --ACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCAC 143216 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 | ||||| | || || ||||| ||||| || ||| || || |||| |||| || | Sbjct 143215 TGTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGT 143156 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | ||||| ||||| ||||||||||| | ||| | || |||| ||||| || | Sbjct 143155 TGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAG 143096 Query 66171 ACTCAATGATGGCGTGCCAAAG 66192 ||||| || || | |||||| Sbjct 143095 CCTCAAGAATAGCATACCAAAG 143074 >seq611 Length=111286 Score = 165 bits (182), Expect = 6e-36 Identities = 216/296 (73%), Gaps = 5/296 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| || || ||||||||||||||||| | |||||| | ||| | Sbjct 15354 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 15295 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| || | |||||| | ||| | | || || ||| | ||||||| Sbjct 15294 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGA-CGATGAGCGTTATTTCATCTC 15236 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || ||||| || || || ||||| ||||| |||||||| || ||||| || Sbjct 15235 TCATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCG 15176 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | |||||||| ||| | ||||| || || ||||||||||||||||| || Sbjct 15175 CTTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 15116 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| | || ||||||| ||| | || || ||||| ||||||| ||||| Sbjct 15115 TGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGC 15060 Score = 149 bits (164), Expect = 5e-31 Identities = 295/436 (68%), Gaps = 3/436 (1%) Strand=Plus/Minus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || ||||| | |||||| |||||| ||||| | ||||| ||| Sbjct 14890 TGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGC 14831 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| | ||||| ||||| || ||| ||| ||| | || || || |||| Sbjct 14830 TGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACG 14771 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| |||| || |||||| | || || | || || |||| || Sbjct 14770 AGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTCTCACT---TGAACCATCGCCCCG 14714 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | | | || ||| | |||||| || | || |||||||| || ||| Sbjct 14713 ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTCTTGA 14654 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | |||||| | || || | ||| | |||||||| | | ||||||| |||||||||| Sbjct 14653 CAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTG 14594 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || ||||| || || |||||||| | | | || | ||| | || || | | Sbjct 14593 AGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTTCAACTCTCCCA 14534 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || ||||| | || |||||||| || || ||||| | Sbjct 14533 ACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGC 14474 Query 61916 GTGTAGGCGACTATCA 61931 |||| || ||||| || Sbjct 14473 GTGTTGGTGACTACCA 14458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563721547120