Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq586 197 1e-45
seq405 168 5e-37
>seq586
Length=168373
Score = 197 bits (218), Expect = 1e-45
Identities = 406/601 (68%), Gaps = 2/601 (0%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || |||||||| |||| || |||||||| ||||| || |||| ||||| |
Sbjct 81301 CATGAACAGATCAGGGGTCCACAGCGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTT 81360
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
||||| || ||||| | || |||||||| ||||| ||||||||||| || || |||||
Sbjct 81361 ACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTA 81420
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
|| || || | ||| || ||| || || |||||||| || | ||| |||||
Sbjct 81421 AATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTAGCAGTGTTGTT 81480
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
||| || || | ||| || || | |||||||| ||||| ||||| | ||| |||
Sbjct 81481 GAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGA 81540
Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639
||| || || || |||||| || || || ||||| || || |||||||||||
Sbjct 81541 GCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCAT 81600
Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAG 66699
|||||| | || | | || || |||||| || |||| || | |||
Sbjct 81601 GGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAG 81660
Query 66700 GTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTG 66759
| |||| || ||| ||||||| ||| || | || ||| || || || | ||| ||
Sbjct 81661 GAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATG 81720
Query 66760 CGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCC 66819
|| ||||| | |||||||| | ||| ||||| ||| | ||||| || | |||
Sbjct 81721 AGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTCAATATTGTTGCC 81780
Query 66820 ATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-T 66878
|||||| || | ||| ||||||| | || || || || || | || || || |
Sbjct 81781 ATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTC-AGCAACCTTGCCAT 81839
Query 66879 TGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAAT 66938
|||| ||| | |||||| || || || ||||||| ||| || | ||| ||||| |
Sbjct 81840 TGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAAGTTGTAGTTGAAGT 81899
Query 66939 C 66939
|
Sbjct 81900 C 81900
Score = 109 bits (120), Expect = 4e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||| | ||||| || ||||| || |||||||||||||| | ||||||||||| |
Sbjct 80900 ACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACTG 80959
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
||||| | || || ||||| ||||| || ||| || || |||| |||| || ||
Sbjct 80960 TACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTG 81019
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
||||| ||||| ||||||||||| | ||| | || |||| ||||| || | |
Sbjct 81020 CTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCC 81079
Query 66173 TCAATGATGGCGTGCCAAAG 66192
|||| || || | ||||||
Sbjct 81080 TCAAGAATAGCATACCAAAG 81099
>seq405
Length=35189
Score = 168 bits (186), Expect = 5e-37
Identities = 217/296 (73%), Gaps = 5/296 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| || || ||||||||||||||||| | |||||| | ||| |
Sbjct 2020 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 2079
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
|||||||| || | |||||| | ||| | | || || ||| | |||||||
Sbjct 2080 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGA-CGATGAGCGTTATTTCATCTC 2138
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
||||| | || ||||| || || || ||||| ||||| |||||||| || ||||| ||
Sbjct 2139 TCATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCG 2198
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| | |||||||| ||| | ||||| || || |||||||||||||||||| ||
Sbjct 2199 CTTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGAT 2258
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||| | || ||||||| ||| | || || ||||| ||||||| |||||
Sbjct 2259 TGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGC 2314
Score = 145 bits (160), Expect = 6e-30
Identities = 294/436 (67%), Gaps = 3/436 (1%)
Strand=Plus/Plus
Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555
|||| || || | || ||||| | |||||| |||||| ||||| | ||||| |||
Sbjct 2484 TGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGC 2543
Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615
||||||| ||||| | ||||| ||||| || ||| ||| ||| | || || || ||||
Sbjct 2544 TGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACG 2603
Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675
|||| | || || |||||| | || || | || || |||| ||
Sbjct 2604 AGGGACTACACACAGACTTTGCTTGCCTTCTCTTTTCTCACT---TGAACCATCGCCCCG 2660
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
|| || | | | || ||| | |||||| || | || |||||||| || |||
Sbjct 2661 ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTCTTGA 2720
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
| |||||| | || || | ||| | |||||||| | | ||||||| ||||||||||
Sbjct 2721 CAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTG 2780
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855
| || ||||| || || |||||||| | | | || | ||| | || || | |
Sbjct 2781 AGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTTCAACTCTCCCA 2840
Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915
|||| || || |||||||| | || ||||| | || |||||||| || || ||||| |
Sbjct 2841 ACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGC 2900
Query 61916 GTGTAGGCGACTATCA 61931
|||| || ||||| ||
Sbjct 2901 GTGTTGGTGACTACCA 2916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564748763440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |