Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq586 197 1e-45 seq405 168 5e-37 >seq586 Length=168373 Score = 197 bits (218), Expect = 1e-45 Identities = 406/601 (68%), Gaps = 2/601 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| |||| || |||||||| ||||| || |||| ||||| | Sbjct 81301 CATGAACAGATCAGGGGTCCACAGCGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTT 81360 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||| || ||||| | || |||||||| ||||| ||||||||||| || || ||||| Sbjct 81361 ACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTA 81420 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 || || || | ||| || ||| || || |||||||| || | ||| ||||| Sbjct 81421 AATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTAGCAGTGTTGTT 81480 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || || | ||| || || | |||||||| ||||| ||||| | ||| ||| Sbjct 81481 GAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGA 81540 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 ||| || || || |||||| || || || ||||| || || ||||||||||| Sbjct 81541 GCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCAT 81600 Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAG 66699 |||||| | || | | || || |||||| || |||| || | ||| Sbjct 81601 GGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAG 81660 Query 66700 GTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTG 66759 | |||| || ||| ||||||| ||| || | || ||| || || || | ||| || Sbjct 81661 GAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATG 81720 Query 66760 CGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCC 66819 || ||||| | |||||||| | ||| ||||| ||| | ||||| || | ||| Sbjct 81721 AGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTCAATATTGTTGCC 81780 Query 66820 ATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-T 66878 |||||| || | ||| ||||||| | || || || || || | || || || | Sbjct 81781 ATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTC-AGCAACCTTGCCAT 81839 Query 66879 TGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAAT 66938 |||| ||| | |||||| || || || ||||||| ||| || | ||| ||||| | Sbjct 81840 TGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAAGTTGTAGTTGAAGT 81899 Query 66939 C 66939 | Sbjct 81900 C 81900 Score = 109 bits (120), Expect = 4e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| | ||||| || ||||| || |||||||||||||| | ||||||||||| | Sbjct 80900 ACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACTG 80959 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||| | || || ||||| ||||| || ||| || || |||| |||| || || Sbjct 80960 TACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTG 81019 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||||| ||||| ||||||||||| | ||| | || |||| ||||| || | | Sbjct 81020 CTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCC 81079 Query 66173 TCAATGATGGCGTGCCAAAG 66192 |||| || || | |||||| Sbjct 81080 TCAAGAATAGCATACCAAAG 81099 >seq405 Length=35189 Score = 168 bits (186), Expect = 5e-37 Identities = 217/296 (73%), Gaps = 5/296 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| || || ||||||||||||||||| | |||||| | ||| | Sbjct 2020 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 2079 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| || | |||||| | ||| | | || || ||| | ||||||| Sbjct 2080 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGA-CGATGAGCGTTATTTCATCTC 2138 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || ||||| || || || ||||| ||||| |||||||| || ||||| || Sbjct 2139 TCATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCG 2198 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | |||||||| ||| | ||||| || || |||||||||||||||||| || Sbjct 2199 CTTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGAT 2258 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| | || ||||||| ||| | || || ||||| ||||||| ||||| Sbjct 2259 TGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGC 2314 Score = 145 bits (160), Expect = 6e-30 Identities = 294/436 (67%), Gaps = 3/436 (1%) Strand=Plus/Plus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || ||||| | |||||| |||||| ||||| | ||||| ||| Sbjct 2484 TGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGC 2543 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| | ||||| ||||| || ||| ||| ||| | || || || |||| Sbjct 2544 TGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACG 2603 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || || |||||| | || || | || || |||| || Sbjct 2604 AGGGACTACACACAGACTTTGCTTGCCTTCTCTTTTCTCACT---TGAACCATCGCCCCG 2660 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | | | || ||| | |||||| || | || |||||||| || ||| Sbjct 2661 ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTCTTGA 2720 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | |||||| | || || | ||| | |||||||| | | ||||||| |||||||||| Sbjct 2721 CAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTG 2780 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || ||||| || || |||||||| | | | || | ||| | || || | | Sbjct 2781 AGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTTCAACTCTCCCA 2840 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || ||||| | || |||||||| || || ||||| | Sbjct 2841 ACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGC 2900 Query 61916 GTGTAGGCGACTATCA 61931 |||| || ||||| || Sbjct 2901 GTGTTGGTGACTACCA 2916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564748763440