Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 203 3e-47 seq2 165 6e-36 >seq3 Length=3005802 Score = 203 bits (224), Expect = 3e-47 Identities = 407/601 (68%), Gaps = 2/601 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| |||| ||||||||||| ||||| || |||| ||||| | Sbjct 954058 CATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTT 954117 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||| || ||||| | || |||||||| ||||| ||||||||||| || || ||||| Sbjct 954118 ACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTA 954177 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 || || || | ||| || ||| || || |||||||| || | ||| ||||| Sbjct 954178 AATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTAGCAGTGTTGTT 954237 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || || | ||| || || | |||||||| ||||| ||||| | ||| ||| Sbjct 954238 GAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGA 954297 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 ||| || || || |||||| || || || ||||| || || ||||||||||| Sbjct 954298 GCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCAT 954357 Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAG 66699 |||||| | || | | || || |||||| || |||| || | ||| Sbjct 954358 GGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAG 954417 Query 66700 GTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTG 66759 | |||| || ||| ||||||| ||| || | || ||| || || || | ||| || Sbjct 954418 GAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATG 954477 Query 66760 CGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCC 66819 || ||||| | |||||||| | ||| ||||| ||| | ||||| || | ||| Sbjct 954478 AGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTCAATATTGTTGCC 954537 Query 66820 ATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-T 66878 |||||| || | ||| ||||||| | || || || || || | || || || | Sbjct 954538 ATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTC-AGCAACCTTGCCAT 954596 Query 66879 TGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAAT 66938 |||| ||| | |||||| || || || ||||||| ||| || | ||| ||||| | Sbjct 954597 TGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAAGTTGTAGTTGAAGT 954656 Query 66939 C 66939 | Sbjct 954657 C 954657 Score = 113 bits (124), Expect = 4e-20 Identities = 257/382 (67%), Gaps = 16/382 (4%) Strand=Plus/Plus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCG-C 65871 ||||||| ||| | || |||| | | ||||| ||||| |||| ||| | ||| | | Sbjct 953489 TCGGCCAAACCATTGACACCAAGAGCAATGGGGCGATGCCGCATGTTGCT-CTTCTTGGC 953547 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 ||| || ||||||||||| || | ||| ||||| ||||| || || || || || Sbjct 953548 CTCTGGAACAGGGTAGTAGTTTACATCAATAATCTTGTTCAAGTTACGAACCAAGACCTG 953607 Query 65932 CACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACA 65990 ||| | ||| ||| | |||| ||| | | | | | || | | || Sbjct 953608 CACAACCTCGT-GCAGCTTGCCGAAGTCATACTCTCCACG------GGCCGCGTCG---- 953656 Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 ||||| | ||||| || ||||| || |||||||||||||| | ||||||||||| Sbjct 953657 --ACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCAC 953714 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 | ||||| | || || ||||| ||||| || ||| || || |||| |||| || | Sbjct 953715 TGTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGT 953774 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | ||||| ||||| ||||||||||| | ||| | || |||| ||||| || | Sbjct 953775 TGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAG 953834 Query 66171 ACTCAATGATGGCGTGCCAAAG 66192 ||||| || || | |||||| Sbjct 953835 CCTCAAGAATAGCATACCAAAG 953856 >seq2 Length=3755792 Score = 165 bits (182), Expect = 6e-36 Identities = 216/296 (73%), Gaps = 5/296 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| || || ||||||||||||||||| | |||||| | ||| | Sbjct 649432 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 649491 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| || | |||||| | ||| | | || || ||| | ||||||| Sbjct 649492 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGA-CGATGAGCGTTATTTCATCTC 649550 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || ||||| || || || ||||| ||||| |||||||| || ||||| || Sbjct 649551 TCATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCG 649610 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | |||||||| ||| | ||||| || || ||||||||||||||||| || Sbjct 649611 CTTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 649670 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| | || ||||||| ||| | || || ||||| ||||||| ||||| Sbjct 649671 TGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGC 649726 Score = 149 bits (164), Expect = 5e-31 Identities = 295/436 (68%), Gaps = 3/436 (1%) Strand=Plus/Plus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || ||||| | |||||| |||||| ||||| | ||||| ||| Sbjct 649896 TGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGC 649955 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| | ||||| ||||| || ||| ||| ||| | || || || |||| Sbjct 649956 TGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACG 650015 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| |||| || |||||| | || || | || || |||| || Sbjct 650016 AGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTCTCACT---TGAACCATCGCCCCG 650072 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | | | || ||| | |||||| || | || |||||||| || ||| Sbjct 650073 ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTCTTGA 650132 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | |||||| | || || | ||| | |||||||| | | ||||||| |||||||||| Sbjct 650133 CAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTG 650192 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || ||||| || || |||||||| | | | || | ||| | || || | | Sbjct 650193 AGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTTCAACTCTCCCA 650252 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || ||||| | || |||||||| || || ||||| | Sbjct 650253 ACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGC 650312 Query 61916 GTGTAGGCGACTATCA 61931 |||| || ||||| || Sbjct 650313 GTGTTGGTGACTACCA 650328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567874020640