Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19]
669 sequences; 34,880,193 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq385 163 6e-38
seq464 156 8e-36
>seq385
Length=768
Score = 163 bits (180), Expect = 6e-38
Identities = 123/145 (85%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 195 TGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCT 254
|||||| ||| |||| |||| ||||| | ||||| | |||||||||| | | ||| ||
Sbjct 767 TGGAAATCATTCGCAGAGTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGCTACAACTCG 708
Query 255 AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCG 314
||||||||||||||||||||||| |||||||| ||| | | |||||| |||| ||||||
Sbjct 707 AGCAGGGACGAAAGTCGGGCTTAGTGATCCGGTGGTTCCGTATGGAAGGGCCATCGCTCA 648
Query 315 ACGGATAAAAGCTACCCTGGGGATA 339
|||||||||||||||||||||||||
Sbjct 647 ACGGATAAAAGCTACCCTGGGGATA 623
>seq464
Length=583
Score = 156 bits (172), Expect = 8e-36
Identities = 157/200 (79%), Gaps = 3/200 (2%)
Strand=Plus/Minus
Query 30 ACGCCAGTATTCAAG-GAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAAC 88
|||||||| ||| || ||| || |||||||||||||||| ||| ||| | ||||||
Sbjct 199 ACGCCAGT-TTCGAGTGAGGCGTTGTTGGGATACTACCCTTGTGTTATGGCTACTCTAAC 141
Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148
| | || || || | | ||||||||| | ||||||||||||||||||||||||
Sbjct 140 CCAGATAGGT-TATCCCTATCGGAGACAGTGTCTGACGGGCAGTTTGACTGGGGCGGTCG 82
Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208
||||| ||| ||||||||||||||||||| | ||||||| ||| |||||| ||| |||
Sbjct 81 CCTCCTAAAAGGTAACGGAGGCGCCCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCGC 22
Query 209 ACAGTGCAAAGGCAAAAGGG 228
| |||| ||||| | |||||
Sbjct 21 AGAGTGTAAAGGTATAAGGG 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982393427744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |