Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19]
669 sequences; 34,880,193 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq192 298 2e-78
>seq192
Length=1549
Score = 298 bits (330), Expect = 2e-78
Identities = 380/523 (73%), Gaps = 34/523 (7%)
Strand=Plus/Plus
Query 10 CTCTTCGGAGAAGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACAC 69
|||||| || ||| ||| ||||||||||||||||| ||||||||||| ||||
Sbjct 79 CTCTTCTTGGATGAGTTGCGAACGGGTGAGTAACGCGTAGGTAACCTGCCTTGTAGCGGG 138
Query 70 GGATAACATACCGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAG 129
||||||| |||| | |||||||| |||| | | | | |||| |
Sbjct 139 GGATAACTATTGGAAACGATAGCTAATACCGCATAACAATGGATGA-CACATGTCATTTA 197
Query 130 TATCAAAGC------TCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAA 183
| | |||| | | | |||| ||| |||| |||| |||||||||| ||| |
Sbjct 198 TTTGAAAGGGGCAATTGCTCCACTACAAGATGGACCTGCGTTGTATTAGCTAGTAGGTGA 257
Query 184 GGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTG 243
||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 258 GGTAATGGCTCACCTAGGCGACGATACATAGCCGACCTGAGAGGGTGATCGGCCACACTG 317
Query 244 GAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGG 303
| |||||||||||| ||| ||||||||||||||||||||| |||||| || |||||||
Sbjct 318 GGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGG 377
Query 304 CAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTG 363
|| ||||| |||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct 378 GGCAACCCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTG 437
Query 364 T----CCTCAAGGA--------AGA---TAA-----------TGACGGTACTTGAGGAGG 397
| ||||| | ||| || |||||||| | | ||
Sbjct 438 TTGTAAGTCAAGAACGGGTGTGAGAGTGGAAAGTTCACACTGTGACGGTAGCTTACCAGA 497
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
||| |||||||||||||||||||||||||||||||||||||| | |||||| ||||
Sbjct 498 AAGGGACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTGTCCG 557
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|| ||| | |||||||||| | ||| ||| ||||| ||||||
Sbjct 558 GATTTA-TTGGGCGTAAAGCGAGCGCAGGCGGTTTGATAAGTC 599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497589981056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |