Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq52 477 2e-132
seq58 405 9e-111
>seq52
Length=2544
Score = 477 bits (528), Expect = 2e-132
Identities = 295/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||| || |||||||||||||||| | |||| |||||||||| |||| |||||
Sbjct 578 TGGTCCGGCTGGACCTTTCCTTCTGGGGAATCTCATGGCCTTCACTGGCTGTGG-GGGGA 520
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 460
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 459 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 400
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 399 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 340
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||
Sbjct 339 ATTTGCTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGGGA 280
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 279 ACGAAAGTTAGGGG 266
>seq58
Length=968
Score = 405 bits (448), Expect = 9e-111
Identities = 279/313 (89%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65
||| ||| ||| ||| ||| ||| || ||| |||||||||||||||||||| ||||||
Sbjct 154 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTCACTGGGTGTGTCGGGGAA 213
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
||||||||||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 214 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 273
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 274 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 333
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||||||| ||||| | |||||||| ||| ||||||||||||||||||
Sbjct 334 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 393
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct 394 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 452
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 453 CGAAGGTTAGGGG 465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915197162880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |