Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq66 859 0.0 seq55 520 4e-145 >seq66 Length=683700 Score = 859 bits (952), Expect = 0.0 Identities = 595/668 (89%), Gaps = 6/668 (1%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 248758 CCGTGTAAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 248699 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 248698 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 248639 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 248638 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 248579 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| |||||||| |||||| | | ||| |||| | ||| ||||||| ||| | | Sbjct 248578 CTTGCGACCAGACTCGCCCGC-GGGGTTCAGCCGG-CATTCGTGCCGGTGTACTTCCCCG 248521 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || | ||||||| || | | |||||| ||| ||||||||| ||||||| | |||| | Sbjct 248520 TGGGCGGGCCAGCGTCGGTTTGGGCGGCCGGTCAAAGGCCCCTGGAATGTAGTGCCCTCC 248461 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| |||||||| |||||| ||||||||| |||||||| |||| |||||| |||| Sbjct 248460 GGGGCACCTTATAGCCAGGGGTGCAATGCGGCCAGCCTGGACCGAGGAACGCGCTTCGGC 248401 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||| |||||| ||||||| |||| || ||||||||| ||||||||||||||||||||| Sbjct 248400 ACGGACGCTGGCATAATGGTCGTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 248341 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||| Sbjct 248340 CATCTACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGTGGG 248281 Query 499 A--ACCCGTG-AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | ||| || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 248280 AGCCCCCTTGCGGGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 248221 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 248220 AGCGTAGCTGTGGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGG 248161 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 248160 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTAT 248101 Query 676 AGGGGCGA 683 |||||||| Sbjct 248100 AGGGGCGA 248093 >seq55 Length=1047 Score = 520 bits (576), Expect = 4e-145 Identities = 539/699 (77%), Gaps = 49/699 (7%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | || | ||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 741 TGTGATGCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 682 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 681 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 622 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||| Sbjct 621 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTT 562 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCC-GGTGCACTCTTCTGCGG 261 | | ||| | | | | | |||| || | ||||| |||||||| | | | | Sbjct 561 GAAGTCAGTCGCGTCGTCCGGAACTCAGCCTTGCT-TCGGCTTGGTGCACTTTCCGGATG 503 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 | |||||||||| | | | | |||| || || | |||||||| || |||||| Sbjct 502 ACGGGCCAGCATCGATTTTGACCGCCGGAAAAGGGTAGGAGAAATGTGGCACC-TTCGGG 444 Query 322 GGGTGTTATAGCC------------CGG-GGT---------GGAATGCGGCCCGCCTG-- 357 | |||||||| | ||| ||| |||| || || ||||| Sbjct 443 TG-TGTTATAGTCTCCTATCGCATACGGCGGTTGGGATCGAGGAACGCAGCGCGCCTTAT 385 Query 358 GACTGAGGTCCGCGCTC-----CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412 | ||| ||| ||| | | || |||||||||||| |||||| | ||| || ||||| Sbjct 384 GGCTGGGGTTCGCCCACATTCGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGT 325 Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472 |||| |||||||||||||||||||||||| |||||||||||||||| ||||||| || Sbjct 324 CTTGAAACACGGACCAAGGAGTCTAACATACCTGCGAGTGTTTGGGTGGAAAACCCGAGC 265 Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCC----GTG-AGGGTGCACCATCGA---CCG 524 |||||||||||||||| || || || | | ||| |||| |||||| ||| Sbjct 264 GCGTAATGAAAGTGAA---AGTTGAGACCTCTGTCGTGGAGGG-----CATCGATGCCCG 213 Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 ||||| || || || |||| | | ||||||| ||||||||||||||||||||| Sbjct 212 GACCTGACGTTCTCTGACGGATCCGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGT 153 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 152 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCT 93 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 92 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079993350500