Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq290 140 8e-31 >seq290 Length=31424 Score = 140 bits (154), Expect = 8e-31 Identities = 201/279 (72%), Gaps = 11/279 (4%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 28977 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGT 29036 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| | ||||| |||||| | | | ||| | | ||||| ||||||||||||||||| Sbjct 29037 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 29096 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | || | || ||||||| || | ||||| || |||| | ||| |||| || Sbjct 29097 CCCTCATAGATAAGGCCGCCATTAATCGGGGTATCCTTCAAAACCTT--AGTTA--AAAA 29152 Query 187 CCCA--TCAA----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CT 239 || | | || ||| ||| ||| || |||||| | |||||| | |||| | | | Sbjct 29153 CCAAGGTAAATTCGTTACCCTGCCGACATTGGGCAGACATCACACTCAATACTTTGATAT 29212 Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | |||||||||||||||||||||| |||||||||| Sbjct 29213 TTAATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 29251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796091520