Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq290 84.2 7e-14 seq86 77.0 1e-11 >seq290 Length=31424 Score = 84.2 bits (92), Expect = 7e-14 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | ||||||| Sbjct 3057 CAAGTCATCATGGCCTTAATACTGTGGGCTATAGACGTGCCACATACGCCTTAACAAAGG 2998 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||| | | || | ||| |||||| ||| | | | | | ||||||||||| Sbjct 2997 GATGCGATATTGTGAAATGGAGCTAATCCCCAAAATAGGATATAATAT-GGATTGTAGTC 2939 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTG 484 || |||||||||| ||||| ||||| ||||||||||| |||| | | | |||||| Sbjct 2938 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGTATCACCAACGGCACGGTG 2879 Query 485 AAT 487 ||| Sbjct 2878 AAT 2876 >seq86 Length=481 Score = 77.0 bits (84), Expect = 1e-11 Identities = 130/186 (70%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||| ||| || ||| | ||||||| | |||||| ||| | | |||||||| Sbjct 180 CAAGTCATTATGGCCTAAATGCTGTGGGCTATAGACGTGCCACATACGCCTTTACAAAGG 239 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCC---ATAAAGTTGTTCTCAGTTCGGATTGTA 422 | || | | | || | ||| |||||| |||| | | | | |||||||| Sbjct 240 GATGCTATATTGTGAAATGGAGCTAATCCCCAAATAAGGAAAT----AATATGGATTGTA 295 Query 423 GTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT-GCTACG 481 ||||| |||||||||| ||||| ||||| ||||||||||| |||| ||| | ||| Sbjct 296 GTCTGTAACTCGACTACATGAAAAAGGAATTACTAGTAATCGTGAATCACCATCGTCACG 355 Query 482 GTGAAT 487 |||||| Sbjct 356 GTGAAT 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503995337600