Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq58 232 8e-59 seq52 174 2e-41 >seq58 Length=968 Score = 232 bits (256), Expect = 8e-59 Identities = 171/197 (87%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 328 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 269 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 209 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 208 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 149 Query 179 TCGCCGTGAGGCGGACC 195 | |||||||||||||| Sbjct 148 ACACCGTGAGGCGGACC 132 >seq52 Length=2544 Score = 174 bits (192), Expect = 2e-41 Identities = 156/192 (81%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 409 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 468 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 469 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 527 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| | || ||| ||| ||| | | |||||||||| Sbjct 528 CAGCCAGTGAAGGCCATGAGATTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 587 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 588 GTGAGGCGGACC 599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198212540