Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq52 286 4e-75 seq58 233 2e-59 >seq52 Length=2544 Score = 286 bits (316), Expect = 4e-75 Identities = 177/188 (94%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 522 GGAACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 463 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 462 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 404 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 403 CCGTAATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTC 344 Query 181 TTGGATTT 188 |||||||| Sbjct 343 TTGGATTT 336 >seq58 Length=968 Score = 233 bits (258), Expect = 2e-59 Identities = 166/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 210 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 269 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 270 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 328 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 329 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 388 Query 181 TTGGATTTA 189 ||||||||| Sbjct 389 TTGGATTTA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998462400