Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq66 419 4e-115 seq58 237 3e-60 >seq66 Length=683700 Score = 419 bits (464), Expect = 4e-115 Identities = 267/290 (92%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98 ||||||||| || |||| || ||||| ||| |||||||||| |||||||||||||||||| Sbjct 249973 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 249914 Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249913 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 249854 Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218 ||||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||||| Sbjct 249853 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCGAGAGGTCTGGGTAATCTTG 249794 Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249793 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 249734 Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| || || ||||||||| || | |||||||||||||||||||||| Sbjct 249733 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 249684 >seq58 Length=968 Score = 237 bits (262), Expect = 3e-60 Identities = 153/166 (92%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 802 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 861 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 862 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 921 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 ||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 922 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGT 967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197063680