Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq66 419 4e-115
seq58 237 3e-60
>seq66
Length=683700
Score = 419 bits (464), Expect = 4e-115
Identities = 267/290 (92%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98
||||||||| || |||| || ||||| ||| |||||||||| ||||||||||||||||||
Sbjct 249973 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 249914
Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249913 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 249854
Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218
||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||
Sbjct 249853 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCGAGAGGTCTGGGTAATCTTG 249794
Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249793 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 249734
Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| || || ||||||||| || | ||||||||||||||||||||||
Sbjct 249733 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 249684
>seq58
Length=968
Score = 237 bits (262), Expect = 3e-60
Identities = 153/166 (92%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 802 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 861
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 862 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 921
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184
||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 922 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGT 967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197063680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |