Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq66 273 4e-71 seq36 161 2e-37 >seq66 Length=683700 Score = 273 bits (302), Expect = 4e-71 Identities = 235/282 (83%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 245775 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 245718 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 245717 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 245658 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| | Sbjct 245657 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCATGC 245598 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || ||| | | | |||| | | ||| ||| ||||||| || Sbjct 245597 ACCTCAGCAGGCTGGCGAC-GGCTCCTAGGGAGAAGCCCCTGGGAGCT-GGCTGGCGAAT 245540 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| ||||| |||| ||||| |||||| |||||||||| Sbjct 245539 TGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 245498 >seq36 Length=2281 Score = 161 bits (178), Expect = 2e-37 Identities = 215/284 (76%), Gaps = 11/284 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 97 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 154 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 155 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 214 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177 ||| | |||| | ||| |||||| ||| | | ||||| |||||||| | | Sbjct 215 GAA-ACGATGATGTTGGTCCCGCACATACGAGTTGTGTTGAAATAGAGCTTCGGCTCGTG 273 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGC-GGGGCGCTCAGCTGGCGGA 235 |||| | ||||| || || || || |||||| || || || | | | ||| | Sbjct 274 AACCAAATCAGGCAAGC-TGGGCCGGCCGAGCGGAAATGCTTGGTCGGTTTGTTTGCGAA 332 Query 236 TTGCAATT-TCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| ||| ||| || ||| | ||||||||||||||||| Sbjct 333 TTGCAATTATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197539840