Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq248 228 6e-55 seq259 141 7e-29 >seq248 Length=549880 Score = 228 bits (252), Expect = 6e-55 Identities = 767/1189 (65%), Gaps = 75/1189 (6%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || |||||||| | || || | | |||||||| ||||| || ||||| | | Sbjct 23018 AAAGCATCAGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGA-CTT 22960 Query 65867 CTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925 || | |||| || || |||||||| ||||| ||||| || ||||| || || || Sbjct 22959 CTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAA 22900 Query 65926 CACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGC 65984 || || |||| ||| | ||| | || ||| | | || || ||| Sbjct 22899 GACCTGGACGACCTCGTGGAGCTTGC-CAAAGTCATACT--------CGC-CGCGAG--- 22853 Query 65985 CGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAG 66044 | | | || || | |||||||||||||| || |||||||||||||| | ||| || | Sbjct 22852 CAGCATCGACGAAAGTAGGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCG 22793 Query 66045 GAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCT 66104 |||| | ||||| | || || ||||| || || || || ||||| || | |||| Sbjct 22792 GAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCT 22733 Query 66105 GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAA 66164 || || ||||| ||||| ||||||||||||| |||| | || | || ||||| Sbjct 22732 TCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGG 22673 Query 66165 CTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC---- 66220 || | ||| | || |||| ||| || | ||||| | ||||| || ||| Sbjct 22672 TCTGAGCCTCCAGAATAGCGTACCAGAGCTTCTGAGCCTTGATGGTACG-ACGGCCACGG 22614 Query 66221 -CTACCTTTGCGTTCGTA-------------ATGT------------------------- 66241 || |||| ||| | || ||| Sbjct 22613 CCTTCCTTCTCGTACCTACAATACTATTAGCATGAGTTGAGAATACACGAACCAACAAAC 22554 Query 66242 -------TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACA-GACATGGACACT 66293 ||||||||| ||||| ||||| | || || | || | || || | | Sbjct 22553 TTACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCT-T 22495 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || || | ||| | ||| || || | | || ||||| ||| || ||||| | Sbjct 22494 CGTTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCG 22435 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | |||| ||||| ||||| |||||||| |||| |||||| | ||||| || || | Sbjct 22434 GAGTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTAC 22375 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | ||| |||||||| |||| || | ||||| || || ||||||||||| || | | Sbjct 22374 GGAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCAC 22315 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | ||| ||| |||||| ||||| ||||| | || |||||||| || || | || Sbjct 22314 CGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCA 22255 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || || || ||||| || | || |||||||| | ||| ||||| | || | Sbjct 22254 TGGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGA 22195 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGC- 66651 | ||| || |||||||||||||||||||| ||||| ||||| ||| ||| || | Sbjct 22194 TGCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCA 22135 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | |||| | | || ||||||||| ||| |||| ||| | |||| |||| || Sbjct 22134 AAGTGTC--GTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGC 22077 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 ||| || || | ||| || | || ||| || || || | ||||| || ||||| | Sbjct 22076 AAGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTT 22017 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 | ||||| | | ||| ||||||||| | || |||| || || || || | Sbjct 22016 CTGGGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAAC 21957 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTA 66890 ||| |||||||| |||| || || || || ||| || ||| ||||| ||| | Sbjct 21956 GGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCA-CCTTTCCGTTGATCCGCAACA 21898 Query 66891 AGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| || || ||||||||||||| || ||| | ||| |||||||| Sbjct 21897 GGTATGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTAGTTGAAATC 21849 Score = 87.8 bits (96), Expect = 1e-12 Identities = 314/479 (66%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | || || ||| | || | || |||||||| || ||| Sbjct 23741 TCGACGGTGAACTGGATGGGCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATACCCGTC 23682 Query 65138 TTGAGGCCAGCA-CGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 || || || || | | ||| ||| ||||| | || | || |||| | | ||| Sbjct 23681 TTCAGACC--CATCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGC 23625 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGC 65253 || || || || || | |||||| ||| || ||| |||| |||||| || || || Sbjct 23624 TCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAATG-AACGCACCACGGTCCGCTGC 23566 Query 65254 CATGTCAATGATACGACGTCCC----GATATCTCCCAGACGGTCTTGTACAGGCGACGT- 65308 ||| | | ||| ||||| || |||||||| || ||||||||||| || | | Sbjct 23565 CATCTGCAGGAT----CGTCCGCTGGGAGATCTCCCACACCGTCTTGTACAG-CGCCTTG 23511 Query 65309 ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTA 65368 | ||| | || || | |||| |||||| ||||||| ||||| ||||| || Sbjct 23510 ATGTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTTC 23451 Query 65369 CGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428 ||| || ||||||| || | ||||| || | | | || | |||| Sbjct 23450 TTCATGTTGTCCGACCACAGGCCGAGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACC 23391 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || ||||| ||| ||||||||||| ||| || || ||| Sbjct 23390 ACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAG 23331 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | || || ||| | || || ||| ||||| |||||||| ||||||| ||| Sbjct 23330 CACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAA 23272 >seq259 Length=165088 Score = 141 bits (156), Expect = 7e-29 Identities = 335/501 (67%), Gaps = 9/501 (2%) Strand=Plus/Minus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGA 61491 ||| || ||||||||| | || |||||| ||| ||| | | || || | | | || Sbjct 128084 GAAGGCCGATTGGGCCATTAAGTGGATC--CAGGACAGGGAGTCGACCTTCGCTCAGCGT 128027 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 | | || || || | || |||||| | || ||| || || || || | ||||| Sbjct 128026 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 127967 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| | ||||| ||||| || ||||| ||||| |||||| ||| ||| | || || || Sbjct 127966 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 127907 Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671 |||||||| |||| || || ||| |||| ||| | | ||| || || Sbjct 127906 GACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCAC---CTGAACAACCGC 127850 Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT 61730 || | || ||| | || ||| | ||| ||||| || || || ||||| || Sbjct 127849 CCCAGCAAACAGGTTGTTGAAGACATTAT-CGTCGAGGCCGTCGGCATTGAGCAGGAGTT 127791 Query 61731 TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTA 61790 |||||||||||| ||||||| | || | |||||||| | || |||| ||||| Sbjct 127790 CCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTA 127731 Query 61791 TATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATAC 61850 || || ||||| || ||||| ||| |||| | | || | ||| | ||| || | Sbjct 127730 CATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGC 127671 Query 61851 GAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGA 61910 | ||||| || || |||||||| ||| ||||||| || ||||| || || ||||| Sbjct 127670 CACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGA 127611 Query 61911 GAAACGTGTAGGCGACTATCA 61931 ||| || ||||| ||||| || Sbjct 127610 GAAGCGGGTAGGAGACTACCA 127590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566497938400