Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1 167 1e-39 >seq1 Length=4441427 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3712906 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3712847 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3712846 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3712790 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3720874 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3720815 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3720814 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3720758 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3728832 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3728773 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3728772 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3728716 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3736789 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3736730 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3736729 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3736673 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3744748 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3744689 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3744688 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3744632 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3752706 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3752647 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3752646 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3752590 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3760662 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3760603 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3760602 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3760546 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || || Sbjct 3768638 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTCC 3768579 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3768578 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3768522 Score = 154 bits (170), Expect = 8e-36 Identities = 105/117 (90%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| ||| |||| || | Sbjct 3704995 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAATAGAAACACCGTC- 3704937 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3704936 GATCCNTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3704880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399921700