Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-14 >seq1 Length=4441427 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3697614 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3697558 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3697557 GGCAGGGACGTAAT 3697544 Score = 82.4 bits (90), Expect = 5e-14 Identities = 58/64 (91%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 3705562 CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3705505 Query 109 TAAT 112 |||| Sbjct 3705504 TAAT 3705501 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3721450 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3721394 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3721393 GGCAGGGACGTAAT 3721380 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3729408 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3729352 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3729351 GGCAGGGACGTAAT 3729338 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3737365 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3737309 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3737308 GGCAGGGACGTAAT 3737295 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3745324 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3745268 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3745267 GGCAGGGACGTAAT 3745254 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3753282 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3753226 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3753225 GGCAGGGACGTAAT 3753212 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3769214 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3769158 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3769157 GGCAGGGACGTAAT 3769144 Score = 75.2 bits (82), Expect = 7e-12 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| |||||||| | |||||||||| Sbjct 3713481 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGNNGTGTGTACAAAG 3713425 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3713424 GGCAGGGACGTAAT 3713411 Score = 75.2 bits (82), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 4/74 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||| Sbjct 3761236 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAA- 3761181 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 3761180 GGCAGGGACGTAAT 3761167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799915400