Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21]
30 sequences; 35,983,474 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 82.4 5e-14
>seq1
Length=4441427
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3697614 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3697558
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3697557 GGCAGGGACGTAAT 3697544
Score = 82.4 bits (90), Expect = 5e-14
Identities = 58/64 (91%), Gaps = 2/64 (3%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 3705562 CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3705505
Query 109 TAAT 112
||||
Sbjct 3705504 TAAT 3705501
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3721450 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3721394
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3721393 GGCAGGGACGTAAT 3721380
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3729408 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3729352
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3729351 GGCAGGGACGTAAT 3729338
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3737365 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3737309
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3737308 GGCAGGGACGTAAT 3737295
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3745324 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3745268
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3745267 GGCAGGGACGTAAT 3745254
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3753282 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3753226
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3753225 GGCAGGGACGTAAT 3753212
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 3769214 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3769158
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3769157 GGCAGGGACGTAAT 3769144
Score = 75.2 bits (82), Expect = 7e-12
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| |||||||| | ||||||||||
Sbjct 3713481 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGNNGTGTGTACAAAG 3713425
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3713424 GGCAGGGACGTAAT 3713411
Score = 75.2 bits (82), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 4/74 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||
Sbjct 3761236 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAA- 3761181
Query 99 GGCAGGGACGTAAT 112
||||||||||||||
Sbjct 3761180 GGCAGGGACGTAAT 3761167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799915400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |