Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq9 140 8e-31 >seq9 Length=53465 Score = 140 bits (154), Expect = 8e-31 Identities = 201/279 (72%), Gaps = 11/279 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 18037 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGT 17978 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| | ||||| |||||| | | | ||| | | ||||| ||||||||||||||||| Sbjct 17977 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 17918 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | || | || ||||||| || | ||||| || |||| | ||| |||| || Sbjct 17917 CCCTCATAGATAAGGCCGCCATTAATCGGGGTATCCTTCAAAACCTT--AGTTA--AAAA 17862 Query 187 CCCA--TCAA----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CT 239 || | | || ||| ||| ||| || |||||| | |||||| | |||| | | | Sbjct 17861 CCAAGGTAAATTCGTTACCCTGCCGACATTGGGCAGACATCACACTCAATACTTTGATAT 17802 Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | |||||||||||||||||||||| |||||||||| Sbjct 17801 TTAATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 17763 Score = 140 bits (154), Expect = 8e-31 Identities = 201/279 (72%), Gaps = 11/279 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 49336 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGT 49277 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| | ||||| |||||| | | | ||| | | ||||| ||||||||||||||||| Sbjct 49276 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 49217 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | || | || ||||||| || | ||||| || |||| | ||| |||| || Sbjct 49216 CCCTCATAGATAAGGCCGCCATTAATCGGGGTATCCTTCAAAACCTT--AGTTA--AAAA 49161 Query 187 CCCA--TCAA----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CT 239 || | | || ||| ||| ||| || |||||| | |||||| | |||| | | | Sbjct 49160 CCAAGGTAAATTCGTTACCCTGCCGACATTGGGCAGACATCACACTCAATACTTTGATAT 49101 Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | |||||||||||||||||||||| |||||||||| Sbjct 49100 TTAATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 49062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799710016