Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 7e-14 >seq9 Length=53465 Score = 84.2 bits (92), Expect = 7e-14 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | ||||||| Sbjct 12637 CAAGTCATCATGGCCTTAATACTGTGGGCTATAGACGTGCCACATACGCCTTAACAAAGG 12696 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||| | | || | ||| |||||| ||| | | | | | ||||||||||| Sbjct 12697 GATGCGATATTGTGAAATGGAGCTAATCCCCAAAATAGGATATAATAT-GGATTGTAGTC 12755 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTG 484 || |||||||||| ||||| ||||| ||||||||||| |||| | | | |||||| Sbjct 12756 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGTATCACCAACGGCACGGTG 12815 Query 485 AAT 487 ||| Sbjct 12816 AAT 12818 Score = 84.2 bits (92), Expect = 7e-14 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | ||||||| Sbjct 43942 CAAGTCATCATGGCCTTAATACTGTGGGCTATAGACGTGCCACATACGCCTTAACAAAGG 44001 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||| | | || | ||| |||||| ||| | | | | | ||||||||||| Sbjct 44002 GATGCGATATTGTGAAATGGAGCTAATCCCCAAAATAGGATATAATAT-GGATTGTAGTC 44060 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTG 484 || |||||||||| ||||| ||||| ||||||||||| |||| | | | |||||| Sbjct 44061 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGTATCACCAACGGCACGGTG 44120 Query 485 AAT 487 ||| Sbjct 44121 AAT 44123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503999654080