Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 228 6e-55 seq20 136 3e-27 >seq4 Length=2618736 Score = 228 bits (252), Expect = 6e-55 Identities = 767/1189 (65%), Gaps = 75/1189 (6%) Strand=Plus/Plus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || |||||||| | || || | | |||||||| ||||| || ||||| | | Sbjct 313914 AAAGCATCAGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGA-CTT 313972 Query 65867 CTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925 || | |||| || || |||||||| ||||| ||||| || ||||| || || || Sbjct 313973 CTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAA 314032 Query 65926 CACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGC 65984 || || |||| ||| | ||| | || ||| | | || || ||| Sbjct 314033 GACCTGGACGACCTCGTGGAGCTTGC-CAAAGTCATACT--------CGC-CGCGAG--- 314079 Query 65985 CGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAG 66044 | | | || || | |||||||||||||| || |||||||||||||| | ||| || | Sbjct 314080 CAGCATCGACGAAAGTAGGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCG 314139 Query 66045 GAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCT 66104 |||| | ||||| | || || ||||| || || || || ||||| || | |||| Sbjct 314140 GAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCT 314199 Query 66105 GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAA 66164 || || ||||| ||||| ||||||||||||| |||| | || | || ||||| Sbjct 314200 TCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGG 314259 Query 66165 CTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC---- 66220 || | ||| | || |||| ||| || | ||||| | ||||| || ||| Sbjct 314260 TCTGAGCCTCCAGAATAGCGTACCAGAGCTTCTGAGCCTTGATGGTACG-ACGGCCACGG 314318 Query 66221 -CTACCTTTGCGTTCGTA-------------ATGT------------------------- 66241 || |||| ||| | || ||| Sbjct 314319 CCTTCCTTCTCGTACCTACAATACTATTAGCATGAGTTGAGAATACACGAACCAACAAAC 314378 Query 66242 -------TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACA-GACATGGACACT 66293 ||||||||| ||||| ||||| | || || | || | || || | | Sbjct 314379 TTACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCT-T 314437 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || || | ||| | ||| || || | | || ||||| ||| || ||||| | Sbjct 314438 CGTTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCG 314497 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | |||| ||||| ||||| |||||||| |||| |||||| | ||||| || || | Sbjct 314498 GAGTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTAC 314557 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | ||| |||||||| |||| || | ||||| || || ||||||||||| || | | Sbjct 314558 GGAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCAC 314617 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | ||| ||| |||||| ||||| ||||| | || |||||||| || || | || Sbjct 314618 CGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCA 314677 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || || || ||||| || | || |||||||| | ||| ||||| | || | Sbjct 314678 TGGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGA 314737 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGC- 66651 | ||| || |||||||||||||||||||| ||||| ||||| ||| ||| || | Sbjct 314738 TGCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCA 314797 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | |||| | | || ||||||||| ||| |||| ||| | |||| |||| || Sbjct 314798 AAGTGTC--GTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGC 314855 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 ||| || || | ||| || | || ||| || || || | ||||| || ||||| | Sbjct 314856 AAGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTT 314915 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 | ||||| | | ||| ||||||||| | || |||| || || || || | Sbjct 314916 CTGGGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAAC 314975 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTA 66890 ||| |||||||| |||| || || || || ||| || ||| ||||| ||| | Sbjct 314976 GGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCA-CCTTTCCGTTGATCCGCAACA 315034 Query 66891 AGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| || || ||||||||||||| || ||| | ||| |||||||| Sbjct 315035 GGTATGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTAGTTGAAATC 315083 Score = 87.8 bits (96), Expect = 1e-12 Identities = 314/479 (66%), Gaps = 18/479 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | || || ||| | || | || |||||||| || ||| Sbjct 313191 TCGACGGTGAACTGGATGGGCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATACCCGTC 313250 Query 65138 TTGAGGCCAGCA-CGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 || || || || | | ||| ||| ||||| | || | || |||| | | ||| Sbjct 313251 TTCAGACC--CATCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGC 313307 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGC 65253 || || || || || | |||||| ||| || ||| |||| |||||| || || || Sbjct 313308 TCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAATG-AACGCACCACGGTCCGCTGC 313366 Query 65254 CATGTCAATGATACGACGTCCC----GATATCTCCCAGACGGTCTTGTACAGGCGACGT- 65308 ||| | | ||| ||||| || |||||||| || ||||||||||| || | | Sbjct 313367 CATCTGCAGGAT----CGTCCGCTGGGAGATCTCCCACACCGTCTTGTACAG-CGCCTTG 313421 Query 65309 ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTA 65368 | ||| | || || | |||| |||||| ||||||| ||||| ||||| || Sbjct 313422 ATGTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTTC 313481 Query 65369 CGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428 ||| || ||||||| || | ||||| || | | | || | |||| Sbjct 313482 TTCATGTTGTCCGACCACAGGCCGAGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACC 313541 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || ||||| ||| ||||||||||| ||| || || ||| Sbjct 313542 ACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAG 313601 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | || || ||| | || || ||| ||||| |||||||| ||||||| ||| Sbjct 313602 CACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAA 313660 >seq20 Length=3442689 Score = 136 bits (150), Expect = 3e-27 Identities = 334/501 (67%), Gaps = 9/501 (2%) Strand=Plus/Plus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGA 61491 ||| || ||||||||| | || |||||| ||| ||| | | || || | | | || Sbjct 3346904 GAAGGCCGATTGGGCCATTAAGTGGATC--CAGGACAGGGAGTCGACCTTCGCTCAGCGT 3346961 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 | | || || || | || |||||| | || ||| || || || || | ||||| Sbjct 3346962 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 3347021 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| | ||||| ||||| || ||||| ||||| |||||| ||| ||| | || || || Sbjct 3347022 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 3347081 Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671 |||||||| |||| || || ||| |||| ||| | | ||| || || Sbjct 3347082 GACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCAC---CTGAACAACCGC 3347138 Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT 61730 || | || ||| | || || | ||| ||||| || || || ||||| || Sbjct 3347139 CCCAGCAAACAGGTTGTTGAAGACATCAT-CGTCGAGGCCGTCGGCATTGAGCAGGAGTT 3347197 Query 61731 TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTA 61790 |||||||||||| ||||||| | || | |||||||| | || |||| ||||| Sbjct 3347198 CCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTA 3347257 Query 61791 TATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATAC 61850 || || ||||| || ||||| ||| |||| | | || | ||| | ||| || | Sbjct 3347258 CATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGC 3347317 Query 61851 GAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGA 61910 | ||||| || || |||||||| ||| ||||||| || ||||| || || ||||| Sbjct 3347318 CACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGA 3347377 Query 61911 GAAACGTGTAGGCGACTATCA 61931 ||| || ||||| ||||| || Sbjct 3347378 GAAGCGGGTAGGTGACTACCA 3347398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567888556720