Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1320 289 5e-76 >seq1320 Length=3869 Score = 289 bits (320), Expect = 5e-76 Identities = 240/283 (85%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 3520 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 3577 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 3578 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 3637 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || ||| | || |||| ||||||| ||||||||||||| |||| ||||| | Sbjct 3638 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCCTGC 3697 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG--GAAG-CGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| | |||| | |||| | | ||| || | ||||||||| Sbjct 3698 ACCTCAGCAGGCTGGCGACGGCC--CCCGGGGAGAAGCCCCCGGGAGC-CGGCTGGCGGA 3754 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| ||||| |||| ||||| |||||| |||||||||| Sbjct 3755 TTGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 3797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819171509760