Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 seq1 134 1e-26 >seq9 Length=2141799 Score = 140 bits (154), Expect = 3e-28 Identities = 296/437 (68%), Gaps = 5/437 (1%) Strand=Plus/Plus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || |||||| | || ||| ||||| || ||| | ||||| ||| Sbjct 908330 TGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTTCTGGC 908389 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| | ||||||||||| || ||| ||| ||| | || || || || | Sbjct 908390 TGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATG 908449 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || ||| |||||| |||| ||| ||| | ||| || || || Sbjct 908450 AGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCT--CGC-ACCTGAACAACCGCCCCG 908506 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTG-AGGCGGTAACTATCGAACAGGAATTTCTG 61734 || ||||| || || | |||| | || || | || || |||| || ||| Sbjct 908507 ACCCTCAGATTGTGGAGGACGTTAT-CGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTG 908565 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 ||||||||| | || | | || | |||||||| | | |||| ||||| ||| Sbjct 908566 ACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATT 908625 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || ||||||||||| |||||| | | || | || | || ||| | | Sbjct 908626 GAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTCAATGCCACC 908685 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||||||||| |||||||||| || || |||| || ||||| || || |||||||| Sbjct 908686 AACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTCTTCGAGAAG 908745 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| || || || || Sbjct 908746 CGTGTCGGTGATTACCA 908762 >seq1 Length=5043372 Score = 134 bits (148), Expect = 1e-26 Identities = 388/588 (66%), Gaps = 8/588 (1%) Strand=Plus/Minus Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 |||||||||| |||||||||||||| |||| ||||| | ||||| || ||||| | Sbjct 2375179 TCCAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGA 2375120 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||||||||| |||| ||||| ||||| || |||| ||| ||||| || | || Sbjct 2375119 GATCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTG 2375060 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 ||| ||| || || ||||| || || | || |||||||| || || | ||| | Sbjct 2375059 GACGCTTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGG 2375000 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | || | || || || || ||||| || | ||| ||| || || || || Sbjct 2374999 GAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGC 2374940 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCAC 66654 ||| ||||| ||||| || ||||| || ||||||||||| ||||| || | Sbjct 2374939 GGTGCACATTGAGACCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCG 2374880 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 |||| |||| || || ||| || |||| || | || |||||||| ||| Sbjct 2374879 TGTCATAAATA--CCTTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAG 2374822 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 || || | || || | || ||| | || || | || || || || || | | Sbjct 2374821 CTGAGGCTGAGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTG 2374762 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG- 66833 |||||| | | || |||||||| | ||||||| | |||||||| || | | Sbjct 2374761 AGACATCAAGTGATAGGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGA 2374702 Query 66834 CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAG 66892 ||| ||||||| |||| ||||| ||||| | || || ||| | || | | ||| Sbjct 2374701 GACA-CGCATCAAAAGGTGCTGAGGACGTTC-AGCAACCTTTCCATCAATCCGAAGCAAG 2374644 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || || || || || ||||||| || || | ||| ||||||||| Sbjct 2374643 TATGACCGCTCAAGAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAATCG 2374596 Score = 127 bits (140), Expect = 2e-24 Identities = 242/351 (69%), Gaps = 14/351 (4%) Strand=Plus/Minus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 || |||||||| | || |||| | | ||||| || ||||||| ||| | ||| Sbjct 2375768 TCAGCCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGCC 2375709 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGC 65932 ||||| ||||||||||||||||||||||| || |||| || || || || ||| Sbjct 2375708 TCAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGC 2375649 Query 65933 ACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACAC 65991 || | | ||| | ||| | || ||| | || | || |||| | | | Sbjct 2375648 ACAACTTCGTGGAGCTTGC-CAAAGTCATA---TTCAC--CG--CGGG-----CAGCATC 2375602 Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 || || |||| ||||||||||| || |||||||||||||| | ||| || ||||| || Sbjct 2375601 AACGAAGGTGGGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGT 2375542 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||| | ||||| || || || || || ||| || || |||| |||| || || Sbjct 2375541 GTACTCAATGATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTT 2375482 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162 ||||| | || || ||||||||||||| |||| | ||| | || ||||| Sbjct 2375481 GCTCTTTCTGTTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTC 2375431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567878866000