Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 143 2e-29 seq3 134 1e-26 >seq6 Length=2060378 Score = 143 bits (158), Expect = 2e-29 Identities = 297/437 (68%), Gaps = 5/437 (1%) Strand=Plus/Minus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || |||||| | || ||| ||||| |||||| | ||||| ||| Sbjct 1145839 TGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTATCTTCTGGC 1145780 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| | ||||||||||| || ||| ||| ||| | || || || || | Sbjct 1145779 TGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATG 1145720 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || ||| |||||| |||| ||| ||| | ||| || || || Sbjct 1145719 AGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCT--CGC-ACCTGAACAACCGCCCCG 1145663 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTG-AGGCGGTAACTATCGAACAGGAATTTCTG 61734 || ||||| || || | |||| | || || | || || |||| || ||| Sbjct 1145662 ACCCTCAGATTGTGGAGGACGTTAT-CGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTG 1145604 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 ||||||||| | || | | || | |||||||| | | |||| ||||| ||| Sbjct 1145603 ACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATT 1145544 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || ||||||||||| |||||| | | || | || | || ||| | | Sbjct 1145543 GAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTCAATGCCACC 1145484 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||||||||| |||||||||| || || |||| || ||||| || || |||||||| Sbjct 1145483 AACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTCTTCGAGAAG 1145424 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| || || || || Sbjct 1145423 CGTGTCGGTGATTACCA 1145407 >seq3 Length=2648250 Score = 134 bits (148), Expect = 1e-26 Identities = 388/588 (66%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 |||||||||| |||||||||||||| |||| ||||| | ||||| || ||||| | Sbjct 243149 TCCAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGA 243208 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||||||||| |||| ||||| ||||| || |||| ||| ||||| || | || Sbjct 243209 GATCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTG 243268 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 ||| ||| || || ||||| || || | || |||||||| || || | ||| | Sbjct 243269 GACGCTTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGG 243328 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | || | || || || || ||||| || | ||| ||| || || || || Sbjct 243329 GAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGC 243388 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCAC 66654 ||| ||||| ||||| || ||||| || ||||||||||| ||||| || | Sbjct 243389 GGTGCACATTGAGACCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCG 243448 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 |||| |||| || || ||| || |||| || | || |||||||| ||| Sbjct 243449 TGTCATAAATA--CCTTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAG 243506 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 || || | || || | || ||| | || || | || || || || || | | Sbjct 243507 CTGAGGCTGAGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTG 243566 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG- 66833 |||||| | | || |||||||| | ||||||| | |||||||| || | | Sbjct 243567 AGACATCAAGTGATAGGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGA 243626 Query 66834 CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAG 66892 ||| ||||||| |||| ||||| ||||| | || || ||| | || | | ||| Sbjct 243627 GACA-CGCATCAAAAGGTGCTGAGGACGTTC-AGCAACCTTTCCATCAATCCGAAGCAAG 243684 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || || || || || ||||||| || || | ||| ||||||||| Sbjct 243685 TATGACCGCTCAAGAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAATCG 243732 Score = 127 bits (140), Expect = 2e-24 Identities = 242/351 (69%), Gaps = 14/351 (4%) Strand=Plus/Plus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 || |||||||| | || |||| | | ||||| || ||||||| ||| | ||| Sbjct 242560 TCAGCCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGCC 242619 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGC 65932 ||||| ||||||||||||||||||||||| || |||| || || || || ||| Sbjct 242620 TCAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGC 242679 Query 65933 ACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACAC 65991 || | | ||| | ||| | || ||| | || | || |||| | | | Sbjct 242680 ACAACTTCGTGGAGCTTGC-CAAAGTCATA---TTCAC--CG--CGGG-----CAGCATC 242726 Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 || || |||| ||||||||||| || |||||||||||||| | ||| || ||||| || Sbjct 242727 AACGAAGGTGGGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGT 242786 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||| | ||||| || || || || || ||| || || |||| |||| || || Sbjct 242787 GTACTCAATGATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTT 242846 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162 ||||| | || || ||||||||||||| |||| | ||| | || ||||| Sbjct 242847 GCTCTTTCTGTTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTC 242897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567549381520