Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02-
26] 998 sequences; 30,136,366 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq353 87.8 3e-15
seq100 84.2 4e-14
seq103 78.8 2e-12
seq50 75.2 2e-11
>seq353
Length=30805
Score = 87.8 bits (96), Expect = 3e-15
Identities = 58/62 (94%), Gaps = 2/62 (3%)
Strand=Plus/Minus
Query 4 CGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCC 63
|||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 30422 CGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCC 30365
Query 64 GC 65
||
Sbjct 30364 GC 30363
>seq100
Length=70310
Score = 84.2 bits (92), Expect = 4e-14
Identities = 70/82 (85%), Gaps = 3/82 (4%)
Strand=Plus/Plus
Query 18 GAATTCA-GAATAATTGGTTTTTG-CGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCA 75
|||||| ||| ||||||| | | | || |||||||||||||||||||||| |||||||
Sbjct 46893 GAATTCCTGAAAGATTGGTTATAGACAGC-GTCTGACCAGGCAGTGCCGCGACGCTACCA 46951
Query 76 TCTGCTGGATTATGGCTGAACG 97
||||| |||| |||||||||||
Sbjct 46952 TCTGCCGGATAATGGCTGAACG 46973
>seq103
Length=69533
Score = 78.8 bits (86), Expect = 2e-12
Identities = 45/46 (98%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATC 77
|||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 27194 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGACGCTACCATC 27149
>seq50
Length=85793
Score = 75.2 bits (82), Expect = 2e-11
Identities = 44/46 (96%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 69 GCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 12370 GCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCC 12325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192079872
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |