Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq965 297 3e-78
seq470 77.0 5e-12
>seq965
Length=16247
Score = 297 bits (328), Expect = 3e-78
Identities = 222/258 (86%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2635 TACTCGCTGACCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2576
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||| | |||||||| |||| || ||| |||||||| |||||||||||||
Sbjct 2575 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 2517
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| | | | || |||||||||| || |||||||||||||||||| |||||
Sbjct 2516 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 2458
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct 2457 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 2398
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 2397 AAGAGCTCTCAATCTGTC 2380
>seq470
Length=17903
Score = 77.0 bits (84), Expect = 5e-12
Identities = 93/122 (76%), Gaps = 6/122 (5%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| | || |||||||| ||| |||| ||||||||||||| ||||||||
Sbjct 856 TACTCGCTGGCCCTGTTAGTGTAGCATGCG--CGGCTCAGAACATCTAAGAGCATCACAA 799
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAAT--AGTCCCTCTAAGAAGCCA 118
| || ||| || |||||||| |||| |||| || | |||| |||||||||||
Sbjct 798 AATTGGTATCCCCGTGCACTTCCATAGGCT-TAAGCTGATGGAATCCC-CTAAGAAGCCA 741
Query 119 GC 120
||
Sbjct 740 GC 739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796760231712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |