Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq965 416 5e-114
seq470 187 5e-45
>seq965
Length=16247
Score = 416 bits (460), Expect = 5e-114
Identities = 266/290 (92%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98
||||||||| || |||| || ||||| ||| |||||||||| ||||||||||||||||||
Sbjct 2489 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 2548
Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2549 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 2608
Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218
||||||||||||||| | || ||||| |||||||||||||| |||||||||||||||||
Sbjct 2609 GCGCTACACTGACAGGGTCAGCGAGTACATCACCTTGGCCGAGAGGTCTGGGTAATCTTG 2668
Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2669 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 2728
Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| || || ||||||||| || | ||||||||||||||||||||||
Sbjct 2729 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 2778
>seq470
Length=17903
Score = 187 bits (206), Expect = 5e-45
Identities = 187/238 (79%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 41 AATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACT--ATCGGCTCAAGC 98
||||||| | || || || | ||| ||| |||||||||| |||| | ||| ||| ||||
Sbjct 714 AATAGCCTGTCC-GCATTTGTGGGCCGCTGGCTTCTTAG-GGGATTCCATCAGCTTAAGC 771
Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158
| |||||||| || ||| || | |||||||| ||||||||||||| |||| |||
Sbjct 772 CTATGGAAGTGCACGGGGATACCAATTTTGTGATGCTCTTAGATGTTCTGAGCCG--CGC 829
Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218
|||||||| |||| |||| ||||| || ||||||| | |||||| ||||||||||
Sbjct 830 ATGCTACACTAACAGGGCCAGCGAGTACACCACCTTGATCAAGAGGTCTAGGTAATCTTG 889
Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATG 276
||||| |||||||||| |||||| ||||||||| |||||||||| |||| |||||
Sbjct 890 CTAAACCCTGTCGTGCTTGGGATATAGCATTGCAGTTATTGCTCTGGAACGGAGAATG 947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947151200256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |