Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq965 289 5e-76
>seq965
Length=16247
Score = 289 bits (320), Expect = 5e-76
Identities = 238/283 (84%), Gaps = 10/283 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 6470 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 6527
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 6528 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 6587
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178
||||| |||||| || || |||| ||||||| |||||||||||||| || |||| |
Sbjct 6588 GAACGCGGTGATGCTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCATGC 6647
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235
|||| ||||||| ||| |||| ||||| || || | | ||| ||| |||||||||
Sbjct 6648 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCCCGGGGGCT-GGCTGGCGGA 6704
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| ||| ||||| |||| ||||| |||||| ||||||||||
Sbjct 6705 TTGTAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 6747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819159113728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |