Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq965 289 5e-76 >seq965 Length=16247 Score = 289 bits (320), Expect = 5e-76 Identities = 238/283 (84%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 6470 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 6527 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 6528 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 6587 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| |||||| || || |||| ||||||| |||||||||||||| || |||| | Sbjct 6588 GAACGCGGTGATGCTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCATGC 6647 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| ||||| || || | | ||| ||| ||||||||| Sbjct 6648 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCCCGGGGGCT-GGCTGGCGGA 6704 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||||| |||| ||||| |||||| |||||||||| Sbjct 6705 TTGTAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 6747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819159113728