Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq20 136 3e-27
seq155 131 1e-25
>seq20
Length=61044
Score = 136 bits (150), Expect = 3e-27
Identities = 212/297 (71%), Gaps = 7/297 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || ||||| |||||||| | ||||| ||||| ||
Sbjct 2916 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCTGAGGAAATCGATCTG 2975
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
|| || || || | || ||| | || | | ||| || || | | |||||
Sbjct 2976 TCGAAGGATTTGCACGATTGGAACAACCGCCTGAACGA-CGACGAGCGCTACTTCATCTC 3034
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
| || |||| ||||| ||||| || || || || ||||||||||| | |||| ||
Sbjct 3035 TCGCGTTCTGGCTTTCTTCGCCGCCTCAGATGGCATTGTCAATGAGAACCTGCTGGAGCG 3094
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| | ||||| || || | ||||| |||||||||||||| |||||||| |
Sbjct 3095 ATTCAGCGGA-GAGGTTCAGGTCCCCGAGGCTCGTTGTTTCTACGGGTTCCAGATCATGA 3153
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
| ||||| |||||||||| | ||| |||| |||||||| ||||||| |||||
Sbjct 3154 TCGAGAACATCCACTCGGAAACCTACTCCCTTCTGATCGATACCTACATCAAGGAGC 3210
>seq155
Length=53423
Score = 131 bits (144), Expect = 1e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
|| ||| | || ||||||||||| || | |||||||||||| | |||||| |||||| |
Sbjct 16368 ACGAACGTAGGGAGGGCAAGAGAAGCCAAGTTGCAGACAGCGACCTCGTCGGGAGCGCTG 16427
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
||||| |||||||| ||||| || || || ||| || |||||||| |||| || ||
Sbjct 16428 TACTCAACAATTTCAGTGCATAGGTTGGAGCTGCGGATAGTGCCCAAGTTCTTCTGGTTG 16487
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
||||| ||||| ||||| ||||||| ||| | || | ||||||||| || | |
Sbjct 16488 CTCTTCTTGTTGCAAGCATCTTTGTACAGCATAAAGGGGTTTCCGGTCTCAGTCTGAGCC 16547
Query 66173 TCAATGATGGCGTGCCAAAG 66192
|| | || || | ||||||
Sbjct 16548 TCGAGAATAGCATACCAAAG 16567
Score = 123 bits (136), Expect = 2e-23
Identities = 318/476 (67%), Gaps = 14/476 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| |||||||||||||| | | | || ||| |||||| || |||||||||||||||
Sbjct 15471 TCCACCGTGAACTGGATGGGAGCGGAGGCGGCCATGGTCCGCAGGTAGTACATGCCGGTC 15530
Query 65138 TTGAGGCCAGCA-CGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATA-ATTCGGC 65194
|| ||||| || | | ||| ||| ||||| | || | || |||| | | |||
Sbjct 15531 TTCAGGCC--CATCTTCCAGCCCGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGC 15587
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || || | |||||| |||||| ||||| ||| || || || |||
Sbjct 15588 TCCTTCAGGTGGATGTTGAGCGACTGGGACTGATCAATGTAGGCACCCCGGTCGGCCGCC 15647
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314
|| | | |||| ||| || |||||||| |||||||||||||||| | ||
Sbjct 15648 ATCTGCAGAATACCTCGTTGGGAAATCTCCCACACGGTCTTGTACAGGCTCTTGATGTCT 15707
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
|| || | |||| |||||| || |||| | ||||| ||||| || |||
Sbjct 15708 GCGGGGATGTTGGGGATGTTCTGGACCGATCCACCATCCGCAATGATGCGGTTCTTCATG 15767
Query 65375 GACTCTGACCACAAACCCAAATCGA-TAAGATGTTG---AACCAAGTGACGATTGATGAC 65430
|| ||||| | ||||| |||| ||| ||| | ||||| | |||| |||
Sbjct 15768 TTATCCGACCAAAGACCCAGGTCGACCAAGTCCTTGAGCAGCCAAG----GGTTGACGAC 15823
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
||||||||||| | || |||||||| |||||||| |||||| ||| || ||| |
Sbjct 15824 CTGGAACTCGCCCGCCAAAACACGACGCGAGTAGATGTTCGACGTGTAGGGCTCGAAGCA 15883
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546
|| || ||| || || || || || || |||||||| || |||| ||
Sbjct 15884 CTCGTTGAAGCCCAGGATCTGACTCGTGCTGGCCGTCGGCATGGGTGCCACCAGCA 15939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397543036705280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |