Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1029 482 4e-134 seq4 197 3e-48 >seq1029 Length=2344 Score = 482 bits (534), Expect = 4e-134 Identities = 296/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 749 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 691 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 631 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 630 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 571 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 570 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 511 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| || Sbjct 510 ATTTGCTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGGGA 451 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 450 ACGAAAGTTAGGGG 437 >seq4 Length=262797 Score = 197 bits (218), Expect = 3e-48 Identities = 224/294 (76%), Gaps = 10/294 (3%) Strand=Plus/Minus Query 6 GGTCCGGCCGGGCCTTTCCTTCTGGGGATC---CG-CATGCCCTTCACTGGGTGTGCCGG 61 |||| || || ||||||| |||| ||| || |||| ||| ||| |||| || Sbjct 242807 GGTCTAGCTGGACCTTTCCGTCTGCGGAAGGAGCGTCATGGCCTCCACGAACTGTG--GG 242750 Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121 | | | ||||||||| | ||||| ||| | ||| || |||||||||| ||| Sbjct 242749 GAAACTAGGACTTTTGCCACAAAAAAGCTAGTGAGTTTTAATCAGGCCTTTGACTGAA-- 242692 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 ||||| |||||| ||||||| |||| |||| ||| |||||||||||||||||| |||| Sbjct 242691 CATTACCATGGA-TAATAGACCAGGATCTGCGATTCCATTTTGTTGGTTTCTAGGGCCGC 242633 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 | |||||||||||||||||||| ||||| |||||||| ||| | || |||| | |||||| Sbjct 242632 CATAATGATTAATAGGGATAGT-GGGGGCGTCAGTATCCAACTCTCGGAGGCGGAATTCT 242574 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295 | ||||| | ||| || ||| | ||||||| || ||||| |||||||||||| Sbjct 242573 TAGATTTGCTCAAGTCTCACTGCCACGAAAGCATTTACCAAAGATGTTTTCATT 242520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915190582592