Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1009 306 7e-81
seq1029 104 4e-20
>seq1009
Length=225
Score = 306 bits (338), Expect = 7e-81
Identities = 189/202 (94%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
Sbjct 225 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTAC 166
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 165 ATCACCTTGGCCGAGAGGTCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGC 106
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||||||||||||||||||||||||||||||||||||| || || ||||||||| || |
Sbjct 105 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAGGCACGAGTCATCAGCTCGTGCC 46
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||
Sbjct 45 GATTACGTCCCTGCCCTTTGTA 24
>seq1029
Length=2344
Score = 104 bits (114), Expect = 4e-20
Identities = 72/82 (88%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98
||||||||| || |||| || ||||| ||| |||||||||| ||||||||||||||||||
Sbjct 82 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 23
Query 99 CGATGGAAGTTTGAGGCAATAA 120
|||||||||| | ||||||||
Sbjct 22 CGATGGAAGTGCGCGGCAATAA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947190253312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |