Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 856 0.0
seq4 113 1e-22
seq27 86.0 2e-14
>seq1029
Length=2344
Score = 856 bits (948), Expect = 0.0
Identities = 492/504 (98%), Gaps = 0/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 906 GTACTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 965
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1025
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1026 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 1085
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 1145
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1146 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCATTGGT 1205
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1206 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 1265
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1325
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1326 GCCATTCGCAGTTTCACCGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1385
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 1386 AGACAAGCATATGACTACTGGCAG 1409
>seq4
Length=262797
Score = 113 bits (124), Expect = 1e-22
Identities = 117/155 (75%), Gaps = 14/155 (9%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||| || ||||||| |||||||||||||||| ||||||| ||||| ||||||||
Sbjct 242931 GTATTCGTTCCAATCGTGAGACCCAAAAGAGCCCCTCGTCAGTATCTATTGCCACTACCT 242990
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|| ||| | ||||||||||| ||| |||||||| | ||||| ||||||||| ||
Sbjct 242991 ACCTGTGCCAGGATTGGGTAAGTTGTGCGCCTGC------CATTGGACGTGGTAGCCATT 243044
Query 121 TCT--------CAGGCTCCCTCTCCGGAATCGAAC 147
|| |||||| |||| ||||||||||||
Sbjct 243045 CCTCAGGTAGCCAGGCTTCCTCCCCGGAATCGAAC 243079
>seq27
Length=857455
Score = 86.0 bits (94), Expect = 2e-14
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGC 251
|||||||||| ||||| |||||||||| |||||| ||||| |||||| |||||||||||
Sbjct 106757 TACCATCGAA-GTTGACGGGGCAGAAATATGAATGGACCATTGCCGGCGCAAGGCCATGC 106815
Query 252 GATTCGTTA 260
||||| |||
Sbjct 106816 GATTCATTA 106824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510384457984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |