Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1029 856 0.0 seq4 113 1e-22 seq27 86.0 2e-14 >seq1029 Length=2344 Score = 856 bits (948), Expect = 0.0 Identities = 492/504 (98%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 906 GTACTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 965 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1025 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1026 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 1085 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1086 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 1145 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct 1146 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCATTGGT 1205 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1206 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 1265 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1325 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 1326 GCCATTCGCAGTTTCACCGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1385 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 1386 AGACAAGCATATGACTACTGGCAG 1409 >seq4 Length=262797 Score = 113 bits (124), Expect = 1e-22 Identities = 117/155 (75%), Gaps = 14/155 (9%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||| || ||||||| |||||||||||||||| ||||||| ||||| |||||||| Sbjct 242931 GTATTCGTTCCAATCGTGAGACCCAAAAGAGCCCCTCGTCAGTATCTATTGCCACTACCT 242990 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || ||| | ||||||||||| ||| |||||||| | ||||| ||||||||| || Sbjct 242991 ACCTGTGCCAGGATTGGGTAAGTTGTGCGCCTGC------CATTGGACGTGGTAGCCATT 243044 Query 121 TCT--------CAGGCTCCCTCTCCGGAATCGAAC 147 || |||||| |||| |||||||||||| Sbjct 243045 CCTCAGGTAGCCAGGCTTCCTCCCCGGAATCGAAC 243079 >seq27 Length=857455 Score = 86.0 bits (94), Expect = 2e-14 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGC 251 |||||||||| ||||| |||||||||| |||||| ||||| |||||| ||||||||||| Sbjct 106757 TACCATCGAA-GTTGACGGGGCAGAAATATGAATGGACCATTGCCGGCGCAAGGCCATGC 106815 Query 252 GATTCGTTA 260 ||||| ||| Sbjct 106816 GATTCATTA 106824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510384457984