Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq40 196 4e-45 seq27 154 1e-32 >seq40 Length=974685 Score = 196 bits (216), Expect = 4e-45 Identities = 394/578 (68%), Gaps = 6/578 (1%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| |||| || |||||||| ||||| || |||| ||||| | Sbjct 723467 CATGAACAGATCAGGGGTCCACAGAGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTT 723408 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||||| ||||| | || | ||||||||||| ||||| ||||| || || ||||| Sbjct 723407 ACCGTGATTCTTGCGAAGATCCAAGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTA 723348 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 || ||||| | ||| || ||| || || |||||||| || | || ||||| Sbjct 723347 AATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCCTGGTCGACATATCTGGCAGTGTTGTT 723288 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || || | ||| || || | |||||||| || |||||||| | ||| ||| Sbjct 723287 GAACACGCGAAGCATGGGAACAATACCGTTAGAAGAACCGTTGGTGCCACCAATGTAGGA 723228 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 ||| || || || |||||| || ||||| ||||||||||| ||||||||||| Sbjct 723227 GCCTGTGGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGGTCTTCGAGATCAT 723168 Query 66640 AGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGG 66697 |||||| || | | |||| | | || || |||||| || |||| || | | Sbjct 723167 GGCACAAGTCTTGAGAGTGTC--GTAGATACCTTCAATGCTATCCTCCTTCATATCGACG 723110 Query 66698 AGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCG 66757 ||| |||| || || ||||| | ||| || | || ||| || || || | || Sbjct 723109 AGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCAGCATTGAACAGTGTAGGAGACGCA 723050 Query 66758 TGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCG 66817 || || ||||| | | |||||| || ||| ||||| ||| | |||||||| | Sbjct 723049 TGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTTCAATGTTGTTA 722990 Query 66818 CCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC 66877 || ||||| |||| ||| ||||||| | || || || || || | || || || Sbjct 722989 CCGTGAATACCGACGGCAACACGCATCAACAAGTGCTGGGGACGCTC-AGCAACCTTGCC 722931 Query 66878 -TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||||| ||| | |||||| || || || ||||||| Sbjct 722930 GTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTGA 722893 Score = 129 bits (142), Expect = 5e-25 Identities = 620/968 (64%), Gaps = 36/968 (4%) Strand=Plus/Minus Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || |||| || ||| ||| || ||| || |||||| || || ||||| | | | Sbjct 724639 TGAATGTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATTTGCAGG 724580 Query 65264 ATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TCAATTGGAAT 65322 || ||| || || ||||| ||||||||||| || | | || || ||||| Sbjct 724579 ATGGCACGCTGGGAGATTTCCCACACGGTCTTGTAGAGA-GCCTTAATGTCGGCGGGAAT 724521 Query 65323 CTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGA 65382 | ||||| ||| || ||||||| | || || || || || ||| || || Sbjct 724520 ATTGGGAATGTTCTGAACGGAACCACCATCCGCGATGATACGGTTCTTCATGTTGTCCGA 724461 Query 65383 CCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCG 65440 ||||| || | |||| ||||| |||| ||| ||| |||| ||| |||||||| Sbjct 724460 CCACAGGCCAAGGTCGACAAGATCCTTGAG--AAGCCACGGGTTGACGACCTGGAACTCA 724403 Query 65441 CCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTG 65500 || | || ||||| || |||||||| || ||| || || || |||| || | Sbjct 724402 CCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTTGAAG 724343 Query 65501 CCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAAT 65560 || ||||| ||| || |||||| ||||| || || |||||||| ||| |||| Sbjct 724342 CCCAGAATCTGGCTGGTGCTTGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCGCACA 724283 Query 65561 CCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACA 65620 |||||| |||| || || | ||||||| ||| | ||| ||| | Sbjct 724282 CCGTTCTGGGCAATCTTCGCCTTCAGAGCATCCCAGTCCCAGA--GGTC---CGTGGGGG 724228 Query 65621 TCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTA 65680 | | | |||||| || | || ||| | || | | | || || || | | | Sbjct 724227 TTCT-GTCCCACATGTCATACTGGAGGATACCTTGAGAGACGGGAGAGCCCTCGTAGGTC 724169 Query 65681 TCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGCAAAATAAAT 65739 || || || ||||||||| || | ||| | | || || || | ||| || Sbjct 724168 TCATAAGGACCAAACTCCTTGGCCAGCTCACAAGAAGCAGTC-AGAGCACCGTGATAGAT 724110 Query 65740 GGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCAT 65799 |||||| || || | || || | | ||||| | ||| | |||| || || Sbjct 724109 GGTCTCAAAGATCTGGATGTTTAGCTGTCTGGCCTCGGCAGAGTCGAATGGCAGACGCA- 724051 Query 65800 CAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAA 65856 || ||| | | ||||||||||| | || |||| | | ||||| ||||| |||| Sbjct 724050 --GGGCAAGGAAGGCATCGGCCAGACCATTGACACCAAGAGCAATGGGGCGATGGCGCAT 723993 Query 65857 ATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAAT 65915 ||| | ||| | |||| || |||||||| || ||||| |||||||| ||||| | Sbjct 723992 GTTGCT-CTTCTTGGCCTCGGGAACAGGGTAATAGTTGATGTCGATAATCTTGTTCAAGT 723934 Query 65916 TGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGA 65974 |||| || || ||||| | ||| ||| | |||| ||| | | | | Sbjct 723933 TGCGAACCAAGACTTGCACAACCTCGT-GCAGCTTGCCGAAGTCATATTCTCCA------ 723881 Query 65975 TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034 |||| ||| | || || | ||||| || ||||| || |||||||||||||| Sbjct 723880 -CGGG-----CGGCGTCGACGAAGGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCA 723827 Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094 | ||||||||||| | ||||| | || || ||||| ||||| || ||| || || Sbjct 723826 ACTTCGTCAGGAGCACTGTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTT 723767 Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154 |||| |||| || || ||||| ||||| ||||||||||| | ||| | || || Sbjct 723766 CCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTG 723707 Query 66155 CCGGTCTC 66162 || ||||| Sbjct 723706 CCAGTCTC 723699 >seq27 Length=857455 Score = 154 bits (170), Expect = 1e-32 Identities = 301/440 (68%), Gaps = 11/440 (3%) Strand=Plus/Minus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || ||||| | || ||| |||||| ||||| | ||||| ||| Sbjct 682792 TGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCTTTTGCTTCCATCTTCTGGC 682733 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| |||||| | ||||| ||||| || ||| ||| ||| | || || || |||| Sbjct 682732 TGAAGAAGCGTGGATTGATGCCGGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACG 682673 Query 61616 AGGGCATGCATTGTGATTTTGC-TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 |||| |||| ||| ||||| || || || ||| | || | || | || Sbjct 682672 AGGGACTGCACACTGACTTTGCCTGCCTT-CTGTTCTCGCACT------TAAACCATCGC 682620 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGT--TCGT-GAGGCGGTAACTATCGAACAGGAATTT 61731 | || || || | |||| | | |||| ||||| || | ||||||||||| || Sbjct 682619 CCCGACAAGAAGGTTGTTGAGGATATCATCGTTGAGGCTGTGGCCATCGAACAGGAGTTC 682560 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 |||| |||||| | || ||| ||| | |||||||| | | || |||| ||||| Sbjct 682559 TTGACAGACGCTCTTCCTGTCGGCCTCCTGGGCATGAACTCTAAGCTGATGTGCCAGTAC 682500 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 ||||| || ||||| ||||| |||||||||| | || | ||| | ||| || | Sbjct 682499 ATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCCCTCGGAAACAAGAAGTACTACAACTCT 682440 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 |||||| || || |||||||| | || || || | || ||||| || || || ||| Sbjct 682439 CCAAACCCCTTCGACTTCATGGAGAGTATCTCTCTTGCAGGAAAGACCAACTTCTTTGAG 682380 Query 61912 AAACGTGTAGGCGACTATCA 61931 || ||||| || ||||| || Sbjct 682379 AAGCGTGTTGGTGACTACCA 682360 Score = 154 bits (170), Expect = 1e-32 Identities = 214/297 (72%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| || || ||||||||||||||||| | |||||| | ||| | Sbjct 683254 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 683195 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 || ||||| || | |||||| | || | || || || ||| | | ||||| Sbjct 683194 TCTAAAGATCTGCACGACTGGAACAACCGCCTAAAT-GA-CGATGAGCGTTACTTCATCT 683137 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 ||||| | || ||||| || || || ||||| |||||||||||||| | |||| | Sbjct 683136 CTCATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTCAATGAGAACCTGCTGGAGC 683077 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||||| | |||||||| ||| | ||||| || || ||||||||||||||||| | Sbjct 683076 GTTTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGGTGCTTCTACGGCTTCCAGATCATGA 683017 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 | ||||| | || ||||||| ||| | || || ||||| ||||||| ||||| Sbjct 683016 TTGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGC 682960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563014124560