Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq445 693 0.0
seq631 369 2e-99
>seq445
Length=5370
Score = 693 bits (768), Expect = 0.0
Identities = 559/665 (84%), Gaps = 13/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 1822 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1763
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1762 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1703
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||
Sbjct 1702 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 1643
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| | | | ||| || || ||| ||||||||||| | | | |
Sbjct 1642 ACGACCAGACTTGGACCCGGCGAATCATCCAGCGTTCTC-GCCGGTGCACTTTGCCGGGC 1584
Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
| |||||||||||||| ||| || | ||| |||||| | |||||||| || || || |
Sbjct 1583 TCCAGGCCAGCATCAGTTCGCGCCGGGGGACAAAGGCTCGGGGAATGTAGCTCC--TCCG 1526
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC-TCCGGCT 379
|| |||||||||||| | | || || | | |||||||||| ||||| || ||
Sbjct 1525 GGAGTGTTATAGCCCCTTGCGCAACGC-CCTGGGGCGGACTGAGGTTCGCGCATCTCGCA 1467
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| || |||| ||||||||| |||||||||||||||||| |
Sbjct 1466 AGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 1408
Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|| |||||||||||| |||||| |||||| | ||||||||||||||||||| ||||| |
Sbjct 1407 TTCGTATGCGAGTGTTCGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 1348
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1347 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAGGAGC 1292
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1291 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 1232
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||
Sbjct 1231 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 1172
Query 679 GGCGA 683
|||||
Sbjct 1171 GGCGA 1167
>seq631
Length=320
Score = 369 bits (408), Expect = 2e-99
Identities = 275/318 (86%), Gaps = 7/318 (2%)
Strand=Plus/Minus
Query 357 GGACTGAGGTCCGCGC-TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTT 415
|||||||||| ||||| || || ||||||||||||||||||| || |||| ||||||||
Sbjct 313 GGACTGAGGTTCGCGCATCTCGCAAGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTT 254
Query 416 GGAACACGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGC 474
| |||||||||||||||||| | || |||||||||||| |||||| |||||| | |||
Sbjct 253 GAAACACGGACCAAGGAGTCGT-CTTCGTATGCGAGTGTTCGGGTGTTAAACCCCTACGC 195
Query 475 GTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGT 534
|||||||||||||||| ||||| || | || ||| |||||||||||||||||||
Sbjct 194 GTAATGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCTGATGT 139
Query 535 CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCC 594
||||||||||||||||| ||||||| | |||||||||||| |||||||||||||
Sbjct 138 TCTCGGATGGATTTGAGTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCC 79
Query 595 TGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAA 654
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 78 TGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAA 19
Query 655 TCGATCGTCAAATTTGGG 672
||||||||||||| ||||
Sbjct 18 TCGATCGTCAAATATGGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079985242400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |