Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq445 693 0.0 seq631 369 2e-99 >seq445 Length=5370 Score = 693 bits (768), Expect = 0.0 Identities = 559/665 (84%), Gaps = 13/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 1822 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1763 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1762 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1703 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||| Sbjct 1702 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 1643 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | |||||||||| | | | ||| || || ||| ||||||||||| | | | | Sbjct 1642 ACGACCAGACTTGGACCCGGCGAATCATCCAGCGTTCTC-GCCGGTGCACTTTGCCGGGC 1584 Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | |||||||||||||| ||| || | ||| |||||| | |||||||| || || || | Sbjct 1583 TCCAGGCCAGCATCAGTTCGCGCCGGGGGACAAAGGCTCGGGGAATGTAGCTCC--TCCG 1526 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC-TCCGGCT 379 || |||||||||||| | | || || | | |||||||||| ||||| || || Sbjct 1525 GGAGTGTTATAGCCCCTTGCGCAACGC-CCTGGGGCGGACTGAGGTTCGCGCATCTCGCA 1467 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||||||||||| || |||| ||||||||| |||||||||||||||||| | Sbjct 1466 AGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 1408 Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| |||||| |||||| | ||||||||||||||||||| ||||| | Sbjct 1407 TTCGTATGCGAGTGTTCGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 1348 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1347 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAGGAGC 1292 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1291 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 1232 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || || Sbjct 1231 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 1172 Query 679 GGCGA 683 ||||| Sbjct 1171 GGCGA 1167 >seq631 Length=320 Score = 369 bits (408), Expect = 2e-99 Identities = 275/318 (86%), Gaps = 7/318 (2%) Strand=Plus/Minus Query 357 GGACTGAGGTCCGCGC-TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTT 415 |||||||||| ||||| || || ||||||||||||||||||| || |||| |||||||| Sbjct 313 GGACTGAGGTTCGCGCATCTCGCAAGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTT 254 Query 416 GGAACACGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGC 474 | |||||||||||||||||| | || |||||||||||| |||||| |||||| | ||| Sbjct 253 GAAACACGGACCAAGGAGTCGT-CTTCGTATGCGAGTGTTCGGGTGTTAAACCCCTACGC 195 Query 475 GTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGT 534 |||||||||||||||| ||||| || | || ||| ||||||||||||||||||| Sbjct 194 GTAATGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCTGATGT 139 Query 535 CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCC 594 ||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| Sbjct 138 TCTCGGATGGATTTGAGTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCC 79 Query 595 TGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAA 654 || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 78 TGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAA 19 Query 655 TCGATCGTCAAATTTGGG 672 ||||||||||||| |||| Sbjct 18 TCGATCGTCAAATATGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079985242400