Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq445 726 0.0
seq17 118 3e-24
>seq445
Length=5370
Score = 726 bits (804), Expect = 0.0
Identities = 465/504 (92%), Gaps = 2/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3874 GTACTCATTCCGATTACAAGACCCATAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 3933
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3934 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 3993
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 3994 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 4053
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 4054 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 4113
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||| |||||||||| |||||| | ||||| |||||
Sbjct 4114 CAAGGCCATGCGATTCGAGAAGTTATTGTGAATCACCAGAGAGCCCAG-AGGGCATTGGT 4172
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| ||| |||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 4173 TTTTAATCCAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 4232
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 4233 AATTACCACAGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 4292
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 4293 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 4351
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 4352 AGACAAGCATATGACTACTGGCAG 4375
>seq17
Length=293396
Score = 118 bits (130), Expect = 3e-24
Identities = 71/75 (95%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 6 CATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 70337 CATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCACG 70396
Query 66 TGTCGGGATTGGGTA 80
|||||||||||||
Sbjct 70397 AATCGGGATTGGGTA 70411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510389608448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |