Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq203 266 3e-66 seq60 158 1e-33 >seq203 Length=54532 Score = 266 bits (294), Expect = 3e-66 Identities = 1047/1626 (64%), Gaps = 62/1626 (4%) Strand=Plus/Plus Query 65354 GCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GA 65410 ||||| || ||||| ||||| || ||||| | |||| |||| |||| || | Sbjct 6344 GCAATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGT 6403 Query 65411 ACCAAGTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTG 65470 | | || || |||| || ||||| || || | ||| ||||| || || |||||| Sbjct 6404 AGCCAGGGA---TTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTG 6460 Query 65471 GACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGC 65530 |||||| || || ||| | ||| |||| || ||||| || | ||||| || || ||| Sbjct 6461 GACGTGTAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGC 6520 Query 65531 ATGGGAGCGACCAACAATGAGTTTCGCAATCC---GTTCATTTCAATGTTG--TGACGCA 65585 ||||| |||| || ||||||||| || ||||| | || || || | ||| || Sbjct 6521 ATGGGGGCGAGCAGCAATGAGTTGCG-AATCCCATGCTCCTTGATCTGCTCCTTGAGGCT 6579 Query 65586 ATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCA 65645 || |||| | ||| | | | | | | | || ||| |||||| || || | Sbjct 6580 AT----CCCACTCCCAGA---GGTCA--GAAGGCTTC-ACGTCCCACATGTCGAACTGAA 6629 Query 65646 GGGT----TCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701 || | ||||| ||| || || || |||| | |||| |||| |||||| Sbjct 6630 GGATGCCCTCCGA----GGCGGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTG 6685 Query 65702 GCAAGTT-GACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT 65760 || | || || || | | ||| || ||| |||||||||||| || || | || Sbjct 6686 GCCAATTCGAGAGAGGCAGT-GAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTT 6744 Query 65761 AAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCC 65818 || ||||| || ||| |||| | ||||| | || ||| | |||| ||| || Sbjct 6745 GAGCTCACGGGCTTCAGGTGACTCGAATGGCATGCGCA--AGGCAAGGAAAGCGTCAGCG 6802 Query 65819 AGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGT 65878 ||||| || || |||| ||| || || || || |||| ||| || ||||| | Sbjct 6803 AGACCCTGGACGCCAACACCAATAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGG 6862 Query 65879 ACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA 65938 || ||||||| |||| ||| || || | |||| || || || || ||| || Sbjct 6863 ACGGGGTAGTGGTTGACATCAATGATTCTGTTCAGGTTACGAACAACGACCTGCGTGA-- 6920 Query 65939 CGTCGCAATTGTTC--GAAATCAAAATGTTTAGGACGATCG--GGAGTGCCGGACACCAC 65994 | ||| | ||| ||| || | || | ||| | ||| | || Sbjct 6921 CCTCGTGAAGCTTCTGGAAGTCGTAGCGT------CCCTCGTTGTAGT--------CAAC 6966 Query 65995 AAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATA 66054 ||| ||| || || ||||| || | |||||| ||||| | ||| ||||| || | || Sbjct 6967 AAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGCGACCTCATCAGGGGCAGAGTA 7026 Query 66055 CTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACT 66114 ||||| |||||| ||||| || || || ||| || || ||||| |||| ||||| || Sbjct 7027 CTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGTTCCCAAGTTCTTCTGATTGCT 7086 Query 66115 CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTC 66174 ||| | || || ||||||||||| | |||| | ||| | || ||||| |||| || Sbjct 7087 CTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATTACCCGTCTCGGTCTGGGCTTC 7146 Query 66175 AATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTT 66233 | ||||| || ||| || | || | || || || |||| || | || | Sbjct 7147 CAGGATGGAGTACCAGAGCTTCTGGGCACGAATGGT-CGCACGACCCTTGCCCTCACGCT 7205 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 | || | || ||||| || || || || | || | ||| | || || | Sbjct 7206 CATACTTCTCATAGAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCATT 7265 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || |||||||| | ||||||||| | || ||| ||||| ||| || ||||| | Sbjct 7266 CGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCTTCATGAAAAGATCGG 7325 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | ||||| || || ||| | ||| || ||||| || || | ||||| || || | Sbjct 7326 GAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCTTACCGTGGTTCTTTC 7385 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 |||| || ||||||||||| | ||||| ||||| || |||| ||| ||||| || | | Sbjct 7386 GCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAATGCAC 7445 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| |||||| ||||| || || | || |||||||| ||||| | || Sbjct 7446 CAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAAACACGAAGCA 7505 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || | || || || || |||| |||||||| | ||| || || || || | Sbjct 7506 TGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAA 7565 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGC 66651 || ||| ||||||| || |||||||| ||| |||| ||||| || || || | Sbjct 7566 TACGGTGGACATTCAAGCCGATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGA 7625 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 |||| | ||||| || ||| ||| |||| ||| | |||| |||| || Sbjct 7626 GCGTGTC--ATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACGAGGAAGCAAGACGA 7683 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 || || || |||||| | || |||||| ||||| | || || |||||| | Sbjct 7684 CAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTGGGCGAGGCATGTGTAAAGAGTTT 7743 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 || |||||| || ||| || || | ||| ||||| || || || || |||| Sbjct 7744 GCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATTGTCTCCCCAGATACCGAC 7803 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891 ||| ||||| | | || ||| ||||| ||||| | | | |||| | | | Sbjct 7804 AGCAACACGCATAATCATGTGTTGGGGCCGCTCGACAATCTTGCCGTTGAGTTTGAGAAG 7863 Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951 || || || || | ||||||| ||||||||| ||| ||||| || | ||| || Sbjct 7864 ATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCTCTGTCATAGAC 7923 Query 66952 GATGGC 66957 ||||| Sbjct 7924 AATGGC 7929 >seq60 Length=156840 Score = 158 bits (174), Expect = 1e-33 Identities = 241/335 (72%), Gaps = 9/335 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| || |||||||||||||||| || ||| ||||| || Sbjct 140608 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACGGCCGAAGAGATCGATCTG 140549 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || ||||| || | |||||| | ||| | | || | || || | ||||| Sbjct 140548 TCAAAAGATTTGCACGACTGGAACAATCGTCTGAATGAT-GACGAGAAATACTTCATCTC 140490 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | |||| || ||||| ||||| ||||| |||||||| ||||| || | || || Sbjct 140489 CCACATACTGGCATTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAACTTGGTTGAGCG 140430 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | || || ||||| | ||||| ||||| || ||||| |||||||| | Sbjct 140429 CTTCA-GCGGTGAAGTCCAAGTCCCTGAGGCTCGTTGCTTTTACGGATTCCAGATCATGA 140371 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||| | ||| | | | ||||| || ||||||| ||||| | Sbjct 140370 TGGAGAACATCCACTCGGAAACATACTCTCTCTTAATCGACACCTACATCAAGGAGCATG 140311 Query 61382 CGGAACGTGAACGAT-TGTTCAATGCCATCGAGAC 61415 | | || ||| | | ||||||||||||||||| Sbjct 140310 CTCAGCGC-AACTACCTCTTCAATGCCATCGAGAC 140277 Score = 136 bits (150), Expect = 3e-27 Identities = 300/446 (67%), Gaps = 9/446 (2%) Strand=Plus/Minus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 || ||| | || ||||| | || || ||| | || ||||| || | ||||| | ||| Sbjct 140144 CGCTTGGTTGCTTTTGCTGCTGTGGAAGGTATTTTCTTCAGCGGTGCTTTTGCTTCTATC 140085 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| ||||||| ||||| | ||||||||||| |||||| ||| || || || || Sbjct 140084 TTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAATTAATCTCG 140025 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 || || |||||| |||| || ||||| ||||| || || || |||| Sbjct 140024 CGTGATGAGGGCTTGCACACAGACTTTGCCTGCTTGCTGC----ACTCTCACT--TGAAG 139971 Query 61669 CGTCC-GTCGG--AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAG 61725 | | | | | || || | ||||| || || || || || ||||| || Sbjct 139970 CACCGAGCCAGCAAGCAGATGATCCAACAGATTATTACAGATGCTGTCACCATCGAGCAA 139911 Query 61726 GAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCG 61785 || ||||||||||| |||||||| | || | ||||||||| | | ||| | Sbjct 139910 GAGTTTCTGACTGAGGCTTTGCCATGTGCTCTACTGGGCATGAATGCCACATTGATGAAG 139851 Query 61786 CAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTAT 61845 ||||| ||||| ||||| ||||| || ||| | || | | | |||| || | | ||| Sbjct 139850 CAGTACATTGAGTTTGTGGCCGATCGCCTGCTCGTTGCTCTTGGTAACGAGAAGGTGTAT 139791 Query 61846 AATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTT 61905 || ||| || || ||||| |||||||| | || || ||| |||||||| ||||| Sbjct 139790 AAGACGGCCAATCCTTTTGACTTCATGGAGAACATCTCATTGGGCGGCAAGACAAATTTC 139731 Query 61906 TTCGAGAAACGTGTAGGCGACTATCA 61931 || ||||| || || || || ||||| Sbjct 139730 TTTGAGAAGCGAGTTGGTGAGTATCA 139705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564666392320