Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 2e-12
seq23 84.2 8e-11
>seq5
Length=479718
Score = 89.7 bits (98), Expect = 2e-12
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||| || || ||||| | | | |||||||||||||||||||| | || |
Sbjct 127055 CAATTGTCATTCGCGACGGAATAGCGTGTGGGTTGATGATGATGTCAGGTGTGACACCTT 127114
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543
| || || |||||||| || | || | | ||| ||||||||| |||||||| ||
Sbjct 127115 CTCGAGTGAACGGCATATCCTCTTGTCGGTAAG-TGACACCAATGGTACCCTTTTGTCCA 127173
Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569
| |||||||||||||| || |||||
Sbjct 127174 TGACGAGAAGCAAACTTATCACCAAT 127199
>seq23
Length=269906
Score = 84.2 bits (92), Expect = 8e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 364418 AGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACC 364477
||||| || | ||||| || || || | | | ||||||| ||||||||||| || |
Sbjct 57829 AGCTTGCCGACTGTCATTCGGGACGGGAAGCCGTGAGGGTTCATGATGATGTCGGGACAC 57888
Query 364478 ATGCCGTCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTT 364537
| ||||| ||| || ||||| ||||| || ||||||| ||||| | || |||
Sbjct 57889 AGGCCGTTGTCGGCGAATGGCATGTCTTCCTGATCGACGATGATACCAACGACACCTTTT 57948
Query 364538 TGCGCATAGCGAGAAGCAAACTTGTCGCCAA 364568
||| ||| |||||| | |||||||| ||||
Sbjct 57949 TGCCCATGGCGAGAGGAGAACTTGTCCCCAA 57979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884869784726384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |