Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq174 167 1e-39 seq30 95.1 7e-18 >seq174 Length=7792 Score = 167 bits (184), Expect = 1e-39 Identities = 108/117 (92%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct 6027 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAAT-TAACATCGTCC 6085 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6086 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6142 >seq30 Length=307904 Score = 95.1 bits (104), Expect = 7e-18 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 50 TAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109 ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| Sbjct 255418 TAACATCGCCCGATCCCTATTCGGCATAATTTATGGTTAAGACTACGACGGTATCTGATC 255359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278393135700