Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq174 167 1e-39
seq30 95.1 7e-18
>seq174
Length=7792
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||
Sbjct 6027 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAAT-TAACATCGTCC 6085
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6086 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6142
>seq30
Length=307904
Score = 95.1 bits (104), Expect = 7e-18
Identities = 57/60 (95%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 50 TAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109
||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||
Sbjct 255418 TAACATCGCCCGATCCCTATTCGGCATAATTTATGGTTAAGACTACGACGGTATCTGATC 255359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278393135700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |