Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq174 693 0.0
>seq174
Length=7792
Score = 693 bits (768), Expect = 0.0
Identities = 566/675 (84%), Gaps = 14/675 (2%)
Strand=Plus/Minus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 4094 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 4035
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 4034 GGAGGTATATGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 3975
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||
Sbjct 3974 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAG 3915
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251
|||||||||| | |||||||||| | | | ||| || || ||| || |||||||
Sbjct 3914 GGAAGCGCTTACGACCAGACTTGGACCCGGCGAATCATCCAGCGTTCTC-GCTGGTGCAC 3856
Query 252 TCTTCTGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGG 310
| | | | | |||||||||||||| ||| || | ||| |||||| | |||||||| |
Sbjct 3855 TTCGCCGGGCTCCAGGCCAGCATCAGTTCGCGCCGGGGGACAAAGGCTCGGGGAATGTAG 3796
Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370
| ||| | ||| |||||||||||| | | ||| | | | |||||||||| |||
Sbjct 3795 CTCCC--CCGGGAGTGTTATAGCCCCTTGCGCAATAC-CCTGGGGCGGACTGAGGTTCGC 3739
Query 371 GC-TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
|| || || ||||||||||||||||||| || |||| ||||||||| ||||||||||||
Sbjct 3738 GCATCTCGCAAGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTTGAAACACGGACCAA 3679
Query 430 GGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488
|||||| | || |||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct 3678 GGAGTC-GTCTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAA 3620
Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548
|| ||||| || | || ||| ||||||||||||||||||| ||||||||||||
Sbjct 3619 CGCAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTT 3564
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||||| ||||||| | |||||||||||| ||||||||||||||| |||||||||||
Sbjct 3563 GAGTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAG 3504
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3503 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATA 3444
Query 669 TGGGTATAGGGGCGA 683
|||| || |||||||
Sbjct 3443 TGGGCATGGGGGCGA 3429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079943586500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |