Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2440 295 1e-77 seq174 159 6e-37 >seq2440 Length=224 Score = 295 bits (326), Expect = 1e-77 Identities = 176/183 (96%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || || | |||||||||||||||||||||||||||||| Sbjct 182 TACTAAGCTGAATTACCATTGCGGTGA-GATCATCAGTAGGGTAAAACTAACCTGTCTCA 124 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 64 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 63 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 4 Query 181 GAA 183 ||| Sbjct 3 GAA 1 >seq174 Length=7792 Score = 159 bits (176), Expect = 6e-37 Identities = 90/91 (99%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1545 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATC 1604 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||| Sbjct 1605 GATAGGCCACACTTTCATGGTTTGTATTCAC 1635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854377529280