Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2440 295 1e-77
seq174 159 6e-37
>seq2440
Length=224
Score = 295 bits (326), Expect = 1e-77
Identities = 176/183 (96%), Gaps = 1/183 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 182 TACTAAGCTGAATTACCATTGCGGTGA-GATCATCAGTAGGGTAAAACTAACCTGTCTCA 124
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 64
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 63 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 4
Query 181 GAA 183
|||
Sbjct 3 GAA 1
>seq174
Length=7792
Score = 159 bits (176), Expect = 6e-37
Identities = 90/91 (99%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1545 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATC 1604
Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||
Sbjct 1605 GATAGGCCACACTTTCATGGTTTGTATTCAC 1635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854377529280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |