Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2458 141 1e-31 seq2540 114 2e-23 >seq2458 Length=219 Score = 141 bits (156), Expect = 1e-31 Identities = 146/187 (78%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 33 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 92 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAA-TTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 || || |||||| | || |||||||| |||| |||| |||||||||||| |||| | | Sbjct 93 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCC 152 Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 ||| || |||| ||||| ||| ||| || | ||| | || |||||| ||| Sbjct 153 ACACCCCGTGAAGGGCATGGGGGTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGC 212 Query 183 CGTGAGG 189 |||||| Sbjct 213 GGTGAGG 219 >seq2540 Length=208 Score = 114 bits (126), Expect = 2e-23 Identities = 110/135 (81%), Gaps = 7/135 (5%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 149 CTAGAAACCAACAAAATAGACCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 90 Query 66 GGCGTAAGCCTGCTTTGA-ACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG- 123 || || |||||| || ||||||| ||| ||| | ||||||||| |||| ||| Sbjct 89 AGCATAGGCCTGCCGGGAGCCACTCTA--TTTTACAAAGAAAAAGTCCT--TTCCCCCGC 34 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 33 CACACCCAGTGAAGG 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595184835420