Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq174 174 3e-41 seq5 89.7 8e-16 >seq174 Length=7792 Score = 174 bits (192), Expect = 3e-41 Identities = 179/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 50 GACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 540 GACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAG 481 Query 110 AATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTT 169 |||||||||||||||| |||||| | | || |||| | || ||| | ||||||||| Sbjct 480 AATCCATGCCAGAACGCGGTGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTC 423 Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCT 229 |||| | |||||||||| ||| | | ||||||||| ||| | | | Sbjct 422 CGGCTTAGCGTCTTAGCAGGCGATGTTTCCGCGGCGC-AGGAAGCGCGTCGCGGT-ATTT 365 Query 230 GGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| |||| ||||||| || | || ||| |||||||||||||||||| Sbjct 364 CGCGTATTGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 316 >seq5 Length=693879 Score = 89.7 bits (98), Expect = 8e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 59 GTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGA 110 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 60417 GTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGA 60468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819179128320