Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq192 273 3e-71
seq16 77.0 5e-12
>seq192
Length=8169
Score = 273 bits (302), Expect = 3e-71
Identities = 202/229 (88%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 2626 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2569
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 2568 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2509
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 2508 ACCCGGGCCTTCCGGCCAAGG-GAGC-ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 2451
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2450 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2402
>seq16
Length=358990
Score = 77.0 bits (84), Expect = 5e-12
Identities = 61/71 (86%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||| || | |||| ||||||| || |||||||| |||||||||||| ||||
Sbjct 169302 GTACAAAGGGAAGAGCCGTAATCAACGC-AGACTGATGACTTGCGCTTACTAGGGATTT- 169245
Query 61 CTCGTTGAAGA 71
|||||||||||
Sbjct 169244 CTCGTTGAAGA 169234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751980090095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |