Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq192 167 1e-39
seq11 95.1 7e-18
>seq192
Length=8169
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||
Sbjct 2100 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAAT-TAACATCGTCC 2042
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2041 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1985
>seq11
Length=438450
Score = 95.1 bits (104), Expect = 7e-18
Identities = 57/60 (95%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 50 TAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109
||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||
Sbjct 184049 TAACATCGCCCGATCCCTATTCGGCATAATTTATGGTTAAGACTACGACGGTATCTGATC 183990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278392866870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |