Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2640 132 6e-29 seq2704 105 8e-21 >seq2640 Length=210 Score = 132 bits (146), Expect = 6e-29 Identities = 110/133 (83%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 150 CTAGAACCCAACAAAATAGACCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 91 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| | || | |||| ||||| |||| | || Sbjct 90 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTAAAAGAAAAATTCCTGTTTCCCCGCCA 31 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 30 CACCCAGTGAAGG 18 >seq2704 Length=201 Score = 105 bits (116), Expect = 8e-21 Identities = 107/134 (80%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||| |||||||||||| ||||| ||||||| |||||||||||||||||| | || Sbjct 139 CTAGAACCCAACAAAATAGACCCGCAC-TCCTATTTCATTATTCCATGCTAATGTTTCCG 81 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG-C 124 || || |||||| || | ||||| |||| | || | ||||||||| ||||| ||| | Sbjct 80 AGCATAGGCCTGCCGGGAGCCCTCTATTTTTTTAAAAGAAAAAGTCCT-GTTCCCCCGCC 22 Query 125 ACA-CCAATGAAGG 137 ||| ||| |||||| Sbjct 21 ACACCCAGTGAAGG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595184241522