Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq2640 206 3e-51
seq2704 174 2e-41
seq192 113 5e-23
>seq2640
Length=210
Score = 206 bits (228), Expect = 3e-51
Identities = 151/174 (87%), Gaps = 1/174 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| ||||| |||| |||| |||||||||||| | || | |||||||| ||||||||||
Sbjct 37 GGAAACAGGAATTTTTCTTTTAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 96
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| |||||||||||||| |||||||||| || |||||||||||
Sbjct 97 CATTAGCATGGAATAATGAAATAGGACGTGCGGGTCTATTTTGTTGGGTTCTAGGACCG- 155
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTG 174
|||||||||| |||| ||| || |||||| ||||||||||||||||| |||||
Sbjct 156 CCGTAATGATTAATAGGGACAGGCGGGGGGATCAGTATTCAATTGTCAGAGGTG 209
>seq2704
Length=201
Score = 174 bits (192), Expect = 2e-41
Identities = 144/172 (84%), Gaps = 3/172 (2%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||| ||||||||| |||| |||||| ||||| | || |||||||| |||||| | |
Sbjct 28 GGAAC-AGGACTTTTTCTTTTAAAAAAATAGAGGGCTCCCGGCAGGCCTATGCTCGGAAA 86
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||| |||||| |||||||||| || |||||||||||
Sbjct 87 CATTAGCATGGAATAATGAAATAGGA-GTGCGGGTCTATTTTGTTGGGTTCTAGGACCG- 144
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGG 172
|||||||||| |||| ||| ||||||||| |||| ||| |||||||| |||
Sbjct 145 CCGTAATGATTAATAGGGACAGTCGGGGGGATCAGGATTTAATTGTCAGAGG 196
>seq192
Length=8169
Score = 113 bits (124), Expect = 5e-23
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 110 TCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAA 169
|||||||||||| |||||||| |||| ||| ||||||||| |||||||||||||||||
Sbjct 1837 TCTAGGACCGCC-GTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAG 1895
Query 170 AGGTGAAATTCTTGGATTTATT 191
||||||||||||||||||||||
Sbjct 1896 AGGTGAAATTCTTGGATTTATT 1917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511986444320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |