Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq192 452 7e-125
seq16 84.2 4e-14
>seq192
Length=8169
Score = 452 bits (500), Expect = 7e-125
Identities = 287/309 (93%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 2319 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 2378
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2438
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | || |||||||||
Sbjct 2439 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGC-TC-CCTTGGCCG 2496
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2497 GAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2556
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2557 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2616
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 2617 CCCTTTGTA 2625
>seq16
Length=358990
Score = 84.2 bits (92), Expect = 4e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
|||| |||||||||||| ||| |||||||||||| |||||||| ||||||||||||
Sbjct 169228 TATTACTCTTCAACGAGAAATCCCTAGTAAGCGCAAGTCATCAGTCTGCGTTGATTACGG 169287
Query 315 CCCTGCCCTTTGTA 328
| || |||||||||
Sbjct 169288 CTCTTCCCTTTGTA 169301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947174113024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |