Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq192 174 3e-41 >seq192 Length=8169 Score = 174 bits (192), Expect = 3e-41 Identities = 181/232 (78%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 47 TCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGT 106 || |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 7627 TCCGACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGT 7686 Query 107 CAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG 166 ||||||||||||||||||| |||||| | | || |||| | || ||| | ||||||| Sbjct 7687 CAGAATCCATGCCAGAACGCGGTGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGG 7744 Query 167 CTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCA 226 || |||| | |||||||||| ||| | | ||||||||| ||| | | Sbjct 7745 CTCCGGCTTAGCGTCTTAGCAGGCGATGTTTCCGCGGCGC-AGGAAGCGCGTCGCGGT-A 7802 Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | ||| |||| ||||||| || | || ||| |||||||||||||||||| Sbjct 7803 TTTCGCGTATTGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 7854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819178310912